Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0448 ATGGGCCGGTCCGGGCCGAAGAGAGGCGAAACTAGGCTCGCAGAACGGACCCCCTCAGCCGCCCTCACTCGTTCTCGTTCTCGTACCCACCGCTGCCGCCGTGACCATCTCGCCTCAGGGTCTCACTCGGCCTTGCCCTGGATCTCCACCACCTGTCATCGTCTCCATTCTGCAGATTCGGAAGAAATTCTCCACTGCCTGCCTCTCCAGTTTTCCATTAACGTTCTTTGCCTCTCCAGTCTTCCTTCCCAGCGTGGCCGTGGATCTTCGTCGCCCAGTCATCGTTATTGCGGCGCTCACTTCAAATTCGGGTGTTTGACCATGATACGAAATGGTTGCCCTATGCCCCTACCTGCTAGGCCTATGTTCTCTCGCAGTTCTCAAATGCCAGCTATGGCTGCTGTCTCAAGCATCCGGAGTACCTGGGGGCCTAATTTAGGGCGCAAGTCCTGGTTGCCGAAAGGAATGCCTTGCTCAAACATCTCTGCTGCATCAAGCCTACATTTAACTGGGGGTCAAAGTCTTCGTCTTCTGTATCCCATAATCCCCCTGCCATCTAGGCAAAAAAGGTTTTGTGTGGTTCCTCAAGCATCAAAGGATGTCCCATATAGCTTCCGTTATCCTGCCATGACGAAAAAGCCGAGATGGTGGTGGAGGACTCTTGCATGCCTCCCATACCTTATGCCTCTTCATGAGACATGGATGTACGCTGAGACAGCATACCATCTTCACCCCTTTCTGGAAAACTTTGAATTCATGACATACCCTTTCCTTATGGCAATTGGGAGTCTGCCGGGCTGGTTCCTCATGGCTTACTTTTTTGTTGCATATCTCGGAATTGTGAGGAGAAAAGAGTGGCCTCACTTCTTCCGGTTCCATGTTGTGATGGGAATGTTATTGGAGATTTCACTTCAGGTGATAGGGACAGTGAGCCGTTGGATGCCTCTAGCAATTTACTGGGGTAAACTAGGAATGCATTTCTGGACAGCTGTAGCTTTTGCCTACCTGTTTACAGTGTTGGAGTGTATACGGTGTGCTCTTGCTGGGATGTATGCTGATGTTCCTTTTGTATGTGATGCCGCATACATCCAAATTCCTTACGATTAA 1107 0.5059 MGRSGPKRGETRLAERTPSAALTRSRSRTHRCRRDHLASGSHSALPWISTTCHRLHSADSEEILHCLPLQFSINVLCLSSLPSQRGRGSSSPSHRYCGAHFKFGCLTMIRNGCPMPLPARPMFSRSSQMPAMAAVSSIRSTWGPNLGRKSWLPKGMPCSNISAASSLHLTGGQSLRLLYPIIPLPSRQKRFCVVPQASKDVPYSFRYPAMTKKPRWWWRTLACLPYLMPLHETWMYAETAYHLHPFLENFEFMTYPFLMAIGSLPGWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEISLQVIGTVSRWMPLAIYWGKLGMHFWTAVAFAYLFTVLECIRCALAGMYADVPFVCDAAYIQIPYD 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0448 368 MobiDBLite consensus disorder prediction 1 31 - -
Prci10g0448 368 NCBIfam Tic20 family chloroplast protein importer 124 368 IPR005691 -
Prci10g0448 368 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 124 368 IPR005691 -
Prci10g0448 368 Pfam Chloroplast import apparatus Tic20-like 188 361 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0448 Prci-Chr10 3030929 3034097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0448 180 368 Chloroplast and Mitochondria Gene Families AT4G03320 41.667 3.73e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0448 - - pcin:129321656 763.066