Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0445 ATGTCGTCGCAGAGAACGGTGCCGACGCCGTTTCTGACGAAGACGTACCAGTTGGTGGATGATCCGGCCACCGACGACGTCGTATCATGGGGTGAAAGTGGGAACACGTTCGTGGTGTGGAAGCATGCGGATTTTGCCAAGGATTTGCTTCCCAACTACTTCAAGCACAACAACTTTTCAAGCTTCGTGCGCCAGCTGAATACCTATGGATTCCGGAAGATCGTTCCTGACAAATGGGAATTCGCCAACGAATATTTCAAACGAGGACAGAAGGAACTGTTGGCGGAGATCAAACGTCGGAAACCCGTGATCCAATCGGCGCCCGCCACTTCCAACTCCGGCGGGGACGACATGGGATCGACCTCGACCTCGTCTCCAGATTCGAAGAATCTGGGGACCGTGGAGAGTTCTCAAATGGCGAATTTATCGGGGGAGAACGAGAAATTGAGGAAGGATAACGAGATACTGAGCTGGGAGCTGGCGCAGGCGAAGAAGCAGTGCGAGGAGCTGATAAGTTTTCTGAAGGAGCACGTGAAGATGGGGCCGGATCAGATCCATCGGATCATGCGGCAAGGAAGTAGTGGGTCCAGTCGCAAACACGGAGACGAAGATGACGACGAAAACGCGGTAGGTGAAGGGGAGGGGTCTGGTGGGGAAAGCTTGAAACTCTTTGGAGTTAGGTTGGACGTTAGCAGAAGCAGCGCCTCCAACCCCAAGAGAGGCCGCGAAGACCAGATGGCTTGCAGTGGCTCTATTTCTAATAAGCAGCTCAAGACTGTTGACTTTGTTTCCCCCGTGATGATGGAGAGCAGCAAGAGGTCTGCAACTGATGAATCACCTCTCTGCTCTGCTCCTCAACTCAAGTTCTCTTTCTTTCTGTCGACAATATCACAGAATTAA 900 0.5233 MSSQRTVPTPFLTKTYQLVDDPATDDVVSWGESGNTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGQKELLAEIKRRKPVIQSAPATSNSGGDDMGSTSTSSPDSKNLGTVESSQMANLSGENEKLRKDNEILSWELAQAKKQCEELISFLKEHVKMGPDQIHRIMRQGSSGSSRKHGDEDDDENAVGEGEGSGGESLKLFGVRLDVSRSSASNPKRGREDQMACSGSISNKQLKTVDFVSPVMMESSKRSATDESPLCSAPQLKFSFFLSTISQN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0445 299 ProSitePatterns HSF-type DNA-binding domain signature. 50 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g0445 299 SUPERFAMILY "Winged helix" DNA-binding domain 8 100 IPR036390 -
Prci10g0445 299 MobiDBLite consensus disorder prediction 104 147 - -
Prci10g0445 299 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 227 IPR027725 -
Prci10g0445 299 Pfam HSF-type DNA-binding 11 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g0445 299 Gene3D - 3 101 IPR036388 -
Prci10g0445 299 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g0445 299 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g0445 299 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g0445 299 MobiDBLite consensus disorder prediction 191 221 - -
Prci10g0445 299 FunFam Heat stress transcription factor B-4 3 101 - -
Prci10g0445 299 MobiDBLite consensus disorder prediction 105 144 - -
Prci10g0445 299 SMART hsfneu3 7 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Prci10g0445 299 Coils Coil 139 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0445 Prci-Chr10 2999775 3002373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0445 2 270 HSF AT4G36990 51.399 3.79e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Prci10g0445 HSF_DNA-bind 6.5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0445 K09419 - qsa:O6P43_033819 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0445 10 2999775 3002373 Prci5g0204 5 2924186 2926860 CCT
Prci10g0445 10 2999775 3002373 Prci10g0445 10 2999775 3002373 ECH