Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0440 ATGGTACGGAATCAATATAAGCTCTTGGGCATTCAGAAAAAACATTCGGATTCTATACCGAGTCAAGGTGCATCCGATCAGGCACAGCAGCTTGCAAGCTCCACTAAGGTGGCATCAGACAAGACATTATCAGCAGGAGAGGCCAGGTCGTCTGCTGTGTTTCGAGCAGAGATGATCCAATCAAAGTTAGATCCGAGATTCCCTAGCTTTGTGAAGTCATTGGTCAGATCACACGTTGCTGGTTGTTTTTGGATGGGGCTCCCTGCGTTCTTCTGTTTAAGCGCTGGTTGGAGGCAGTTTTCTGCTGCCCACAAATTGCAGGAGGGAGATGTTTTGGTCTTCCAATTAGTTGAACCGTCTAAATTTAAGGTTTATATAGTAAGAGCAAATGGCTTGAGTGAACTGGATGGGGCGGTTTCCCTTCCCAATCTGGACGATCATACCAAGCAAAAAGCAAGAGATAATGCAAATAAGGATGCTCTTCCGAGTAATAGCCCTAAGAGGAAACAACAAAAATCTGATTTACCACCTCCGGTTGTCCAGAAGAAAAAGAAGACTAATGCGTCGAGGATTTCCCCCAAGGTTAGGCAGCGTGCAGAACACTGTGAATATGAAAGTGATGAAGCTGGTTCAGAAGTACTGGAGAGCTTTGGAAGGGAGGTTAAATTCAAGGATGTAAGGGGTTTTGAAAATTTCAGTATCATAGTTGATGGAATTCCAATAGATTCTGAGCTCCCCCATGAGGTTAGAAATAAGTACTACAAACTCTGCCATAGCCAGCAGGCCTTTCTACACGATAATCTCATCAAGGGCATCAACTATAACCTTCTTGTCGGCATCGTATCTGAAGTTGTCAACATTGCTGATGCCCTGAGATCTAGCTCGCTACATATCTCACCCACTGAATTTGCTAAATGGGATAAAGAGTTGCTAGCCTTTGAGTTTTTGGGGATGAATGTGGAATTTTTAAGACACCGGTTATGCAGGCTTGTAAACTTGGCATATGAAACACAAGATGCCTCCGAGACTTCAAGGCATTCGGAGTCCACAGCTGAATTCAGTCGAGCAGATAACGAGATAATGAACATTGAAACAAAGCTGGAAGAATTGAAAGAAGCTTGTGATGGTTTTGGTTCTTATATTGAGAGTTTGAGGTACAAAGGTGGGCGCTTCCATCACTAG 1182 0.4374 MVRNQYKLLGIQKKHSDSIPSQGASDQAQQLASSTKVASDKTLSAGEARSSAVFRAEMIQSKLDPRFPSFVKSLVRSHVAGCFWMGLPAFFCLSAGWRQFSAAHKLQEGDVLVFQLVEPSKFKVYIVRANGLSELDGAVSLPNLDDHTKQKARDNANKDALPSNSPKRKQQKSDLPPPVVQKKKKTNASRISPKVRQRAEHCEYESDEAGSEVLESFGREVKFKDVRGFENFSIIVDGIPIDSELPHEVRNKYYKLCHSQQAFLHDNLIKGINYNLLVGIVSEVVNIADALRSSSLHISPTEFAKWDKELLAFEFLGMNVEFLRHRLCRLVNLAYETQDASETSRHSESTAEFSRADNEIMNIETKLEELKEACDGFGSYIESLRYKGGRFHH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0440 393 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 93 131 IPR044837 -
Prci10g0440 393 MobiDBLite consensus disorder prediction 143 202 - -
Prci10g0440 393 Coils Coil 353 373 - -
Prci10g0440 393 Gene3D - 90 131 IPR015300 -
Prci10g0440 393 MobiDBLite consensus disorder prediction 157 171 - -
Prci10g0440 393 SUPERFAMILY DNA-binding pseudobarrel domain 63 131 IPR015300 -
Prci10g0440 393 ProSiteProfiles B3 DNA-binding domain profile. 93 130 IPR003340 GO:0003677
Prci10g0440 393 CDD B3_DNA 68 128 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0440 Prci-Chr10 2974629 2978565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0440 40 158 B3 DNA Binding Superfamily AT3G19184 34.437 1.13e-21 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0440 - - vra:106768002 414.461