Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0427 ATGCGTTGGTTACCTTCCCTGTCCTTTTCCCATTCTAATGGTATCAAATCCTCCTCTGCCTCTTCTTCGCTTTCCACCTCCGACGGTGACCACCCTAAGAAGTCCACCGATTCCACTCGCGGTTCTGGTGGCGTCTGGCCTTTCGGTACTGGCAAAAAGACTGGCCGCTTCAAGAAGCTTCGACATATTGCCGACAGCGATGGCAAATCCCCTCCCAGGTGGCATGATTCCGATGATGACGCCCTTGTGCCTTTGGCTCATTCCCCGACGCCCTTCGATCGCCAATTCAATTGTTCCAATACATCCTCTTGCGTTTCCCCCTCCATCTCGCCTCAACCCTTGCCCTTGCCGGACTCCGCGCTTTCTCGCCAGAGAGACGCTGATTACCCTTTACCTTCCCCGAAAGACGTGCCAGGGCCCAGCAGCGCTGCCAAAGGGGTCGTGGAGCACGATCAAGTTGCAGGCGTGATGGTCGGTGTCTCCTCTGTTTTTCGAATTCGGAGTGTGTTTGCTAGCTCAGGCTCAAGAAAGAATAAGGCACTTGCGGAAACAGTATCCTCGGGGATGATGCGTCGGGATCTAAGTGTTGGTGAAAGTAATCAAGATAGTTTCTGCATCAGCGTCCCAACTAGGAGTGCTCCAGCTAGTCCTCTGATCAGTCCCTTGGTGAGCCCGAACAATGGGAGATATAGTGATTTCGTTCAATATCATTATGTGTGTCCCCCACCAAATCAATATTGGTCGGCACCGGAGATGGTTACATCCGATGCATCATCAGGAACGACGCCTCCTGCATTATTTGATTTACCTGCATTATCCACTGATACTTCTCCTCATCACAGTCCACGGGGCAGAAGTCCTAATCAAAATCTTAAATGCCGTAGTGGAGCTTCCTCACCCGTGCGTCCCAGGTTATCCCTCGAGACCTCAGTAGCGCGTCGTGACTTCAATGCCCCTGCTCTCAATGTTCACCCCTTACCATTGCCTCCTGGGGCGCCCTTGCTTTCCCCCTCCCCTAAATTATCCCCGACTGTGCCCAAGTTAGAGTCCTCCTCAATGAAAAGCCAATGGCAGAAAGGGAAACTAATTGGGCGTGGTACATTTGGAAGTGTTTATGTCGCCACCAATAGAGAAACTGGAGCATTATGTGCTATGAAGGAAGTAGAAATATTTCCCGATGACCCCAAATCTGCTGAGTGTATAAAACAGTTGGAGCAGGAAATCAAACTTCTTAGCCAGCTGAAACATACAAACATTGTGCAATATTATGGCAGTGAAATCGTTGAAGACCGGTTTTATATTTATCTGGAATATGTCCATCCTGGATCAATTAATAAATATGTCCGTGAACATTGTGGTGCCATAACAGAATCTGTTGTACGTAACTTTACTCGTCATATTCTTTCCGGGCTGGCTTACTTGCATGGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACCTGCTTGTCGATTCTGCTGGGGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCACCTCGCTGGACATGCAGCTGATCTTTCTTTGAAGGGAAGCCCATACTGGATGGCTCCTGAGCTTATGCAGGCAGTGATGCAAAAAGACAACAGCTCTGATCTAGCTTTAGCTGTTGACATTTGGAGCTTGGGTTGTACAATCATAGAGATGCTCACGGGGAAGCCTCCATGGAGTGAATATGAAGGAGCTGCGGCTATGTTTAAGGTTATGAGGGAAGCTCCTCCTATACCGGAGACATTGTCATTGGAAGGTAAGGACTTCCTAAGGTGCTGCTTTAAGAGAAATCCAGCAGAGCGGTCAACTGCTTCAGCTTTACTTGAACATCGGTTCTTGAAAAATGCACAACAGCCAGATGTTACATATTCCATGCAGTCTCACAATGGAATAAACTTGATGGACAAACCCCATAGTCCCAGAGGGCAATCTGAATATTTATCTGATCAGTTGCTTGCTACCGGCTTGCAAATTGCAAAAGGGAAAGCCAGCGAGAGATGA 2016 0.4836 MRWLPSLSFSHSNGIKSSSASSSLSTSDGDHPKKSTDSTRGSGGVWPFGTGKKTGRFKKLRHIADSDGKSPPRWHDSDDDALVPLAHSPTPFDRQFNCSNTSSCVSPSISPQPLPLPDSALSRQRDADYPLPSPKDVPGPSSAAKGVVEHDQVAGVMVGVSSVFRIRSVFASSGSRKNKALAETVSSGMMRRDLSVGESNQDSFCISVPTRSAPASPLISPLVSPNNGRYSDFVQYHYVCPPPNQYWSAPEMVTSDASSGTTPPALFDLPALSTDTSPHHSPRGRSPNQNLKCRSGASSPVRPRLSLETSVARRDFNAPALNVHPLPLPPGAPLLSPSPKLSPTVPKLESSSMKSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKLLSQLKHTNIVQYYGSEIVEDRFYIYLEYVHPGSINKYVREHCGAITESVVRNFTRHILSGLAYLHGKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLAGHAADLSLKGSPYWMAPELMQAVMQKDNSSDLALAVDIWSLGCTIIEMLTGKPPWSEYEGAAAMFKVMREAPPIPETLSLEGKDFLRCCFKRNPAERSTASALLEHRFLKNAQQPDVTYSMQSHNGINLMDKPHSPRGQSEYLSDQLLATGLQIAKGKASER 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0427 671 MobiDBLite consensus disorder prediction 331 350 - -
Prci10g0427 671 MobiDBLite consensus disorder prediction 1 88 - -
Prci10g0427 671 Gene3D Transferase(Phosphotransferase) domain 1 353 650 - -
Prci10g0427 671 SUPERFAMILY Protein kinase-like (PK-like) 344 646 IPR011009 -
Prci10g0427 671 FunFam Mitogen-activated protein kinase kinase kinase 5 354 655 - -
Prci10g0427 671 ProSiteProfiles Protein kinase domain profile. 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0427 671 Pfam Protein kinase domain 358 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0427 671 MobiDBLite consensus disorder prediction 1 29 - -
Prci10g0427 671 SMART serkin_6 357 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0427 671 MobiDBLite consensus disorder prediction 274 296 - -
Prci10g0427 671 MobiDBLite consensus disorder prediction 60 82 - -
Prci10g0427 671 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Prci10g0427 671 MobiDBLite consensus disorder prediction 101 144 - -
Prci10g0427 671 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 19 626 - -
Prci10g0427 671 MobiDBLite consensus disorder prediction 253 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0427 Prci-Chr10 2819643 2824597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0427 1 656 MAP Kinase Kinase Kinase AT5G66850 52.305 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci10g0427 Pkinase 3.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0427 - - qsa:O6P43_033798 801.971