Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0419 ATGGACCTGAGCTTGGATTTGAGTTTGTCTTTTGTCCCCAAAACTATTTCTGAGTTTCTTGGCGAGGTCTCTAAGACCGGAGATAGGCACGAGAAATTAGCGATGCTTGACGACTTTGCCAAGAGATTGGAGGATGAAATGAGGAAGATCGAGGCCTTCAAACGCGAGCTTCCACTCTGCATGCTGATCGTAAACGATGCTATAACGAGGTTGAAGGAGGAGAAAGTACAGTTTGTGGAAATGCTAGATCTACCCGAGATTGAACAATTCATACCATTGAAAGCAAATTCTGGAGAAAACGGCCAAGTAATTATGGAAAAGGATGGCTGTGACAAGAAGAACTGGATGACCTCGGCTCAACTGTGGAGCGCTGAAACCAAATTGAGAAGTGAAAATGATCGGTCTGTGCCGGAGAACCCAATTCAGTCACGAAATCTGAAAAACAAAGGAGGGGCATTTATCCCCTTTAATGGAAACTTGGGCTTGTCAAAGCCAGGGATGAAGGAAGACAAGGAAATCTCACAAGTTCCTAGTCTTAGCTTGATGACTCCAGCGTCCGAACTGAATCTCAAGAATTCAAAAACTTGTAGTAGAAATTGTTCGGGTGCGTCTTTCCTTACAGGCCGGCTTGACGGACAAGGCCAGCCACAACCACAACATTTGCAGCAGAGTCCTAGAAAACAAAGGCGATGCTGGTCACCGGAGCTTCATCGGCGTTTTGTTGATGCGCTTCAACAACTGGGAGGGGCTCAAGTGGCTACTCCTAAACAGATTAGAGAATTAATGCAGGTGGAAGGCCTAACAAACGATGAAGTGAAAAGCCATTTGCAAAAGTATAGACTTCATGTGAGAAGACTTCCAGCTTTACCAATTAACCAAGGAAATGGCTTATGGATGATAGAAAATCAATGTGGAGAGAAGTCAAAAGTAAACATATCACAGTCTGGTTCTCCACAAGGACCTCTCCTACTTGGAGGTTCTGCTAAGGGTCTATCGAGCTCTGGCGATGGCGAAGAAGATGAGAAATCAGATTGCCATAGTTGGAAAGGTGGACTGCACCAGCAAGCGGAAGCTGATTTACTGTCTTAA 1089 0.45 MDLSLDLSLSFVPKTISEFLGEVSKTGDRHEKLAMLDDFAKRLEDEMRKIEAFKRELPLCMLIVNDAITRLKEEKVQFVEMLDLPEIEQFIPLKANSGENGQVIMEKDGCDKKNWMTSAQLWSAETKLRSENDRSVPENPIQSRNLKNKGGAFIPFNGNLGLSKPGMKEDKEISQVPSLSLMTPASELNLKNSKTCSRNCSGASFLTGRLDGQGQPQPQHLQQSPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRLPALPINQGNGLWMIENQCGEKSKVNISQSGSPQGPLLLGGSAKGLSSSGDGEEDEKSDCHSWKGGLHQQAEADLLS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0419 362 SUPERFAMILY Homeodomain-like 225 285 IPR009057 -
Prci10g0419 362 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 349 IPR044787 GO:0003700|GO:0006355
Prci10g0419 362 Pfam Myb-like DNA-binding domain 229 280 IPR001005 -
Prci10g0419 362 MobiDBLite consensus disorder prediction 126 148 - -
Prci10g0419 362 MobiDBLite consensus disorder prediction 209 230 - -
Prci10g0419 362 MobiDBLite consensus disorder prediction 310 362 - -
Prci10g0419 362 Gene3D - 226 283 - -
Prci10g0419 362 Coils Coil 36 56 - -
Prci10g0419 362 NCBIfam myb-like DNA-binding domain, SHAQKYF class 227 282 IPR006447 GO:0003677
Prci10g0419 362 MobiDBLite consensus disorder prediction 334 348 - -
Prci10g0419 362 FunFam Myb family transcription factor 226 284 - -
Prci10g0419 362 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 284 IPR017930 -
Prci10g0419 362 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0419 Prci-Chr10 2781152 2783209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0419 1 277 G2-like Transcription Factor Family AT4G37180 44.170 4.62e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci10g0419 Myb_DNA-binding 1.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0419 - - qsa:O6P43_024686 445.662