Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0409 ATGGCAGAAGTGCTTATAGAACGTGTACTTGACGAACTGTTGAGCAAGGTTTTCGAAGCGAAGGCCAGGGCAATTCAGTTCAGACCCACCCTCGAACGCCTAGCTGCCACCCTCGAGTCAATAAAACCAGTGATCGAACAGATAAATCTATACAACAGGCAACTAGATCGCTCGGGGCAAGAAATAGACAAGTTAATTAAAGATATGAAGAATGGCGAGAAGCTTGTTCTCAAGTGCTCAAAAATCCAGTGGTGGGAATGCTGTTATAAGCCTCAATACCAGGAACAACTTGAAGATTTGGATCAGTCACTTGTCAGGTTCTTTCAAGTTGATATGCAAGTTCAGACGGCGAGGGATGCGATGGAGACGCTGATAGAGGTGAGAGGTATTCGTGTGGAAATGAAGAAACTGAATGCGGTTGCGAGAAATGAAAGGGGTCAATGCTCGGCTCCTGAACCCCCAGCATTCACTGTTGGATTGGATGTTCATGTTGGGGAATTGAAGTTGCGGCTGCTCCGAGATGATGTGTCAGTGATGGTGATCACTGGCTTGGCAGGTTCCGGGAAGACCGCTTTGGCCAAAAAATTCTGTTGGGATGTTGATGTCAGAGGTAAATTCAAGGACAATATCTTCTTCGTCAAATTCTCGGAGACGCCAAACTTGAACCTTATTGTACGGAAGCTTTATCAACACAATGGTCGCCCAGTGCCCGAGCCTCAAAATGATGAAGACGCGATTGACCAATTGAAACTTTTGCTAAAACAAATTGGGGAAAATCCTACACTGTTGGTTCTGGACGATGTTGGGGATCGATCAGAATCTCTTGTTGATAATTTCGTCATGCAGCTGAGAGACTATAAGATTTTAGTGACTTCCAGATTTGCAATTCGAAGATTCGGCACTTTACATTCCTTGAAACCCCTTGGTAATGAGGATGCTATGAAGCTTTTCCGCCACTCAGCAGAACTGAAGGAGAGCAGCCTTGATATTCCTGATCATATTGTGAGAGAGATAGTCCGAGGCTGCAGTGGTTCTCCGATGGTACTAAATGCGATTGGCAGGTCACTCTGTGGGCAGCATTCTGCGGTATGGCAAAGCAGGGCAAAGGAATTGTCAAAGGGTCGTCCGATTTTTGAATCAAATGAGGATCTGCTTGATTCTCTCCTAAAAAGCTTCGATGTCTCGGTTCCTAAGTCAGTAATTAAGGAGCGTTTCATGGACCTAGGTTTATTTCCTGAAGACCAGAAGATTCCTGCAGCTTCTCTTGTTGATATGTGGGTGGAACTGCATGGAGAAGATGACGTAAATGCAATGGAGAAAATTTATGAACTGGCCACCCGTAACGTGCTTGATATTGTTATACGCAGGTCCTTATTGTTGAGCAGGAAATTTGCAAGTGGCACAGGTAACTTAAATAGCTACTTTGTCATGCGACATGATCTTTTTCAAGAGCTAGCTATCCATCAAAGGAAAATTAGCCAGGAACCACTGGAAAAGAGGAAAAGGCTGATTATTAACATAACTGGAAACGATCTTCCCCAGTGGTGGACTGAACAGAAAGAGCATCATATAGCTGCCCATGTATTATCTATATCAACTGATGAATTATTCTCTTCTAATTGGTGCAACTTGATACCAACTGAAGTTGAGGTTCTAGTTTTGAACCTTCGAGGAAAGAAGTACACCATACCAAAGTTCATAGAGAAAATGGGTAAACTAAAAGTTATGTTAATCACAAATTATGGCTTCCACCCCGCTGCTGAGCTAGAGGGTTTAGAACTACTTAATTTGTTGTATGATCTTAAAAGAATTAGGCTGGAGCGTGTTTCAATTCCTTCACTCATTGAGAAAAGAGTGCAGTTGAAGAATCTTCAGAAACTATCTCTATTTATGTGCAATGTAAATGAAGCTTTTAAAAATTGTTCCATCCAAGTTTCAGATATGATGCCAAACTTGGTGGAGTTAAACATTGACTACTGCAATATGGTGGAATTGCCAGTTGGGCTGTGTGGTATTGTCTTCTTGAAGAAGTTGAGTATTACAAGTTGCCACAAGCTTTCTGCACTTCCTGATGAAATTGGAAAGTTGGCCAATTTGGAATTGCTAAGGCTTAGCTCTTGTTCTGATTTGGCGGAGTTTCCAGACTCAGTTACTAATCTTCAAAAGCTAAAACTTCTTGATATCTCTTACTGTGTAAGCCTTATTAAATTGCCAGATCATATGGGTGAATTGCTTAATTTAGAAGAGCTCCACATCACATGTTGCTCGAGATTATGTGACAAGTTGCCACCCACAATCATTAACCTTACGGGCCTAAGAGTTGTGGTGTGTGATGAAGAGATGGCTACTTTATGGGAACCTTGCAAAACCGTCCTTACTGATCTGCATGTAGAGGTGACCCAAGCTGATATTGGCCTAGAATGGCTTTGA 2430 0.4239 MAEVLIERVLDELLSKVFEAKARAIQFRPTLERLAATLESIKPVIEQINLYNRQLDRSGQEIDKLIKDMKNGEKLVLKCSKIQWWECCYKPQYQEQLEDLDQSLVRFFQVDMQVQTARDAMETLIEVRGIRVEMKKLNAVARNERGQCSAPEPPAFTVGLDVHVGELKLRLLRDDVSVMVITGLAGSGKTALAKKFCWDVDVRGKFKDNIFFVKFSETPNLNLIVRKLYQHNGRPVPEPQNDEDAIDQLKLLLKQIGENPTLLVLDDVGDRSESLVDNFVMQLRDYKILVTSRFAIRRFGTLHSLKPLGNEDAMKLFRHSAELKESSLDIPDHIVREIVRGCSGSPMVLNAIGRSLCGQHSAVWQSRAKELSKGRPIFESNEDLLDSLLKSFDVSVPKSVIKERFMDLGLFPEDQKIPAASLVDMWVELHGEDDVNAMEKIYELATRNVLDIVIRRSLLLSRKFASGTGNLNSYFVMRHDLFQELAIHQRKISQEPLEKRKRLIINITGNDLPQWWTEQKEHHIAAHVLSISTDELFSSNWCNLIPTEVEVLVLNLRGKKYTIPKFIEKMGKLKVMLITNYGFHPAAELEGLELLNLLYDLKRIRLERVSIPSLIEKRVQLKNLQKLSLFMCNVNEAFKNCSIQVSDMMPNLVELNIDYCNMVELPVGLCGIVFLKKLSITSCHKLSALPDEIGKLANLELLRLSSCSDLAEFPDSVTNLQKLKLLDISYCVSLIKLPDHMGELLNLEELHITCCSRLCDKLPPTIINLTGLRVVVCDEEMATLWEPCKTVLTDLHVEVTQADIGLEWL 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0409 809 SUPERFAMILY RNI-like 553 775 - -
Prci10g0409 809 Gene3D Ribonuclease Inhibitor 497 793 IPR032675 -
Prci10g0409 809 Gene3D - 398 490 IPR036388 -
Prci10g0409 809 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
Prci10g0409 809 Gene3D - 136 299 IPR027417 -
Prci10g0409 809 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 134 IPR008808 -
Prci10g0409 809 PRINTS Disease resistance protein signature 718 734 - -
Prci10g0409 809 PRINTS Disease resistance protein signature 178 193 - -
Prci10g0409 809 PRINTS Disease resistance protein signature 342 356 - -
Prci10g0409 809 PRINTS Disease resistance protein signature 255 269 - -
Prci10g0409 809 ProSiteProfiles RPW8 domain profile. 1 146 IPR008808 -
Prci10g0409 809 Gene3D - 308 397 IPR042197 -
Prci10g0409 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 393 IPR027417 -
Prci10g0409 809 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 809 IPR039203 GO:0050832
Prci10g0409 809 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0409 Prci-Chr10 2720525 2724564 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0409 610 750 WRKY Transcription Factor Family AT4G12020 32.624 2.43e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0409 - - pcin:129321618 1589.32