Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0390 ATGTCATTTTCTGTGTTCTCGACGCCACAGCAACAACCGCTTTTTCAGCCACCACAGCAGCAACAGCAGGGCAGTTTGTTCTTTCCACAGCAGCAGCAGCAGCAACCGCAATTGCAACTCCAACAGCAGCCGCAACAGCAACAGCAACCGCAACAGCAATTGTTTCTGTTCACTACCGATAAAACTCCCGCTAATTATAGTACCAAGTGGGCGGATCTTCATCCTGATTCTCAGAAGGTTCTCCTTCAGATCGAGGAGCGGATATTAGAGTATAGGGATGAGAGCCTGAGACTGGATCAGTGTGGTCGTCTCTACGACTCTTCAATTTCAAACGAAGGGTTTGAGCTTGATGCGAGCCACATTGTTCAGGAACTTGGGGGCATCAGTACTGCCATGGGACGACAGAAAACTTTGTTGCAGGAACTGATGTTTGTTGTTAAGGATATGTTACGCAACACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCTGGTGGAGGGGGTGCTTCAAGCGCTACAGCCCCTTTGCAGACTCCTGGAACCACTGTAACACCTAGTTCAAGTAGCCAACCAACAACTACAACGATAGTGCCTGTTTTTGATTTTTATTACGGGCTTCCAAAGAAACCGTCACCCTTTTTACAGCAATCAGTCTTAAGATTTGAGAAGTATCTGGGTGAATGCCGCCAGTGGATTGAAGAGTTGGAGCAACTGCTTCTTTTAGATTCTGAGAGAAACATTACTAATAACAGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCATGTGGCTGCAAAGGCGGAAAGCATTCATCAGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGTCGTTGGGGGGAGGTAAATGATCCATTTTTAGAGGCTGATCGGCGAGAAACAGCAAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACATTACACTTACCTGCAAACACGCAGCCTTCAACACAAGTTGCAGGGTTGTTTTCTAGCTCAGCAACTCAAGGGACATTGACTGCCTCACAGACATCTGCAGCAACTACGTTGTCATCATCAGGAAGTGGATTTTCGCTATTTAGCACACCATCTTCAGTTCCACCTTCCTCTACACCATCTATGTTTACAACACCAACAACTTCTGCTCCAGTATCCTCTTTGTTTGGTTCATCCAGTGCTACACCCCAAGCCGCAGCTTTTAGTTCTTCATCATCTTCCTTATTTGGTCCTTCTTCCACTCCCTCTCTGTTCAGTAGTTCTGCTTCACCATTTGGTACGAGTACCGGAGGTTCACTCTTTTCGACTCCCTTTGCTTCAGGTGCTGCAACAGGATCAGGGGCAAGCTTTGGGGCTGCATCAAAATCATCAAGGCCAAAATCCAGAACTGCTCGACGATAA 1452 0.4573 MSFSVFSTPQQQPLFQPPQQQQQGSLFFPQQQQQQPQLQLQQQPQQQQQPQQQLFLFTTDKTPANYSTKWADLHPDSQKVLLQIEERILEYRDESLRLDQCGRLYDSSISNEGFELDASHIVQELGGISTAMGRQKTLLQELMFVVKDMLRNTEVAIRSFMMLRPRFLHPGGGGASSATAPLQTPGTTVTPSSSSQPTTTTIVPVFDFYYGLPKKPSPFLQQSVLRFEKYLGECRQWIEELEQLLLLDSERNITNNRSSLLQSLPKVMTNVHDFFVHVAAKAESIHQYIESMKSAYLADQRRWGEVNDPFLEADRRETARQEAASKRVHPTLHLPANTQPSTQVAGLFSSSATQGTLTASQTSAATTLSSSGSGFSLFSTPSSVPPSSTPSMFTTPTTSAPVSSLFGSSSATPQAAAFSSSSSSLFGPSSTPSLFSSSASPFGTSTGGSLFSTPFASGAATGSGASFGAASKSSRPKSRTARR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0390 483 MobiDBLite consensus disorder prediction 459 475 - -
Prci10g0390 483 MobiDBLite consensus disorder prediction 172 198 - -
Prci10g0390 483 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 471 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Prci10g0390 483 MobiDBLite consensus disorder prediction 459 483 - -
Prci10g0390 483 MobiDBLite consensus disorder prediction 379 406 - -
Prci10g0390 483 MobiDBLite consensus disorder prediction 177 198 - -
Prci10g0390 483 MobiDBLite consensus disorder prediction 421 443 - -
Prci10g0390 483 Gene3D - 215 305 - -
Prci10g0390 483 MobiDBLite consensus disorder prediction 1 51 - -
Prci10g0390 483 MobiDBLite consensus disorder prediction 315 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0390 Prci-Chr10 2645600 2649890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0390 54 483 NAC Transcription Factor Family AT4G37130 64.679 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0390 K14307 - gmx:100776992 532.332