Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0364 ATGGAAGTGCTTCCGTGTGCTGGCGTTCAATATGCTGCAGAATCTGATGGCCCTCAACAGAGTTCGGTAACGTCTTTTGTTTATGAGGGAGAACCTAATTGCTCTGAAAATGGTGAACGTGGTGAATTGGAGGATGGTCAACTTAATGACTCATTACTTAAAATGAAAGGTCCTCAGGTGGAAAGGCAGGGTGAAGTTCAACAGGCAGTTGGCGAATTGTCAGTTAATCCAGATTGGCATTGCAATGGAGCTTCAAATTGTGAATGCCAAGCTGTAGACCCCAAGGAATCTTCTAGTTTCCATGCTTTTGTTGAGGATGAGATGGATGAACCTTGCTTAATATCAGAGAACCCAATTCCCTTTGTGGATACAATTGAAAGTGAATCACCAAACAACAGTAGGGATGGAGAGTTACCACTTGCTGAACCTAGTTGGCTTGAGGGGGATGAGTCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGCATCAGATGTGCCAGAGCTGATTGGCCCTTATCAACTTTGAAAGCAAAACCTACGCATGGCCGAAAGAAATATTTTGTGATATTTTTTCCGCACACAAGGAATTATTCTTGGGCTGATATGATGCTTGTTCGTTCAATCAATGAGTTTCCCCAGCCTATCGCATATAAGACCCATCAAGCAGGATTGAAAATGGTCAAAGATTTGTCTGTTGCCCGACGGTTTATAATGCAAAAGCTGGCTGTTGGCATGCTGAACATCATCGATCAGTTTCACTTGGATGCTTTAATTGAAGCTGCTCGTGATGTGACGTTCTGGAAGGAGTTTGCCTTGGAGGCTTCCCGTAGCAAAGGTTATTGTGATCTTGGTAGAATGCTCCGAAAGCTGCAAAATAGCATAATGCAGCGCTACATAAATGCCAACTGGTTACAGCATTCTTTTCCCATTTGGATCGATCGATGCCAGAATGCAAGTAGTGCTGAATTGATAGAACTACTAAAGGAGGAATTGTTTGATTCTGTATTGTGGAATGATATCGGCACTCTATGGGATGAACCTGTGCAACCAATATTAGGTTTTGAGTGGAAAACTTGGAAGCATGAAGTGATGAAATGGTTTTTTTACTCTCCTTCATTATCTAGCAGCAAAGATATGCAACAGCAGCAGACCTCTGATGGCCCATTCCCATCAAGCCTCCAAGTTTGTCGAAAAAGACCGAAGCTTGAAGTTCGCCGTGCAGAGATGCATGCTTCACAAGTAGAAACTAAGGGTTCAGATCACTCTATTGCACTTGAGACTGACTTGGGCTTCTTTAATAATCAGGACACAGTGAAAACATTAGCAGCTGAGGCTTGTAAACAGGAAGAACTTAGGGAGGCACCTCTACCCACTGATTCACCAGGTAATTTAGTGAACAAATGGAATGACATTGTTGTTGAAGCTGCTACAGATTCCGAGTTCTTGCATACCAAAGCTATGGAATCAACACCTACCAATGAAATGATTGGTCCCAAATCTGTAGAACCTGGGAGTAAGAATCGACAATGTGTGGCTTATATAGAAGCCAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTTTACTGTTGTGTGCATTTGTCCTCTCGGTTTTTAGGCAGCTCTGCTAGGGCAGAAAGACCTGTTTCAGTTGATGCTCCTTTGTGTGAAGGTACAACTGTTCTTGGCACCAGATGCAAGCATCGGGCCCTTCCTGGCTCTTCATTCTGTAAGAAACACAGGCCGCATGCTGAAACAGACTTCACTCCAAATTTACACCAGACTTCCCTAAAGAGGAAGCATGAAGAAAACAATGCAGGTCCGGAGAGCATGATCTGCAAAGACATAGTGCTGGCTGATTCTCAAAGTCCTTTGCAAGTAATTCCAGTTTCAGCCATGGATGATGATACCTTTCATGGAAACAGTAACTCGAATGGGAAACCCATGCGTTTCAGAAATGATCATAATGCAATGGAGGAACATTGCTGTATAGGCTCGTCTCCCTTTGATGACAAGAACCCCTGTCTGGAAACTCCAAAGCGGTATTTCTTGTATTGTGAAAAGCACTTGCCAAGTTGGCTCAAACGTGCACGAAATGGGAAGAGTAGAATAATATCAAAAGAAGTGTTTGCAGAGCTTTTGAGGGACTGCTGCTTACAGGAGCAGAAAGTAAGTCTACATAAAGCGTGTGAGCTTTTTTACAGGCTATTTAAGAGTATTTTATCCCTAAGAAACCCAGTTCCTAAAGAAGTTCAATTCCAGTGGGCTTTGACTGAAGCTTCTAATGATACTAGTGTCAGAGAATTCTTTAAAAAGTTGGTTCATAGCGAAAAAGAGAGAATCAAAGTGATCTGGGGATTCAATGATGACAAAGATGCACCTTCACTCATGGAAGAGATACCTCAATTGCCACCCCCTGTTAATGATAGCTTTGGTAATGAAAATGTCATTGAATGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCGCTTGGCAACCATTGGATGGGAAACCATAAAAAGGAATCACAGTGGCTGTTTAGAGGTTATGCGTGTGCTATTTGCCTGGATTCTTTTACCAACAAGAAAGTCTTGGAAAACCATGTCCAGGAGAGACACCGGGTGCAATTTGTTGAACAATGCATGCTTTTGCAGTGCATTCCTTGTGGTAGCCATTTTGGAAATACTGAACAGCTATGGTTGCATGTTCTATCAGTTCATCCTGTTGATTTTAAAGCATCAAAAGCTCCTGACCAGCAAACTTTGTCTACTGGCGAGGACTCTTCAATACAAATAGAAGCAGAGCAGGTAACTTCAGCCTCTTTGGAGAATAATCTGGATAATTCAGGCGGTTCACGGAAGTTTATTTGTAGGTTTTGTGGGTTAAAGTTTGATTTACTACCTGACCTTGGCCGCCATCATCAAGCTGCTCATATGGGGCCTAATTTAGTTAGCAGCCGTCCCTCGAAGAGGGGAGTTCGTTATTATGCGTATAGGTTAAAATCTGGAAGACTTAGTCGTCCTAGATTCAAAAAAAGTTTGGTGTCAGCATCATATCGGATCAGAAGTAGAGCTAGTGCTAATTTAAAGAGACGCATTCAGGCAACAAAGTCGCTTGGCATTGGGGGAATAACTATACAACCTCAAGTAACTGAGACAACAAATATTTGTAAGTTGGCAGAGTATCAATGTTCTGCTGTTGCTAAGATTTTGTTTTCTGAGATCCAAAAGACTAAGCCTCGGCCAAACAATCATGATATTCTATCAATTTCTCACTCTGCCTGCTGCAAAGTTGGTCTTCAAGCTGCAGTAGAGGAGAAATTTGGTACTCTGCCTGAAAAGCTGTATCTGAAGGCTGCAAAACTTTGCAGTGAACACAATATTCTAGTGAGTTGGCACCAGGAAGGCTTTAATTGTCCTAGAGGTTGCAAGGCGTTGAAGGACCAACCTTTGCTTTCTCACGTAGCATCTCTTCCTAATCGTTTTGTAAAGCAAAAGGCTTTAAATATGTCAGATCCTGCAGTGGACGAGTGGGAGGTGGATGAGTTTCATTACACCATCAATTCGCACCATTTAAAACCAGGATCCTTGCAAAAGGCTGTAGTTGTATGTGATGATATAAGCTTTGGGAAGGAATCAGTTCCAGTGATATGTGTAGTAGATCAAGAACTTCAAAATTCACTTCATATGTGTAGGTCTAATGAACATGCTATGAATCTTTCTATGCCATGGGAGAGCTTTACCTACATTACGAAGCCAATGCTTGATCAATCCCTGAATCTTGATTCAGAGAGTCTGCAGTTGGGATGTTCCTGTTCATATTCTACTTGTAGTCCTGAAACTTGTGCTCATGTATACCTTTTTGATAATGACTATGAAGATGCAAGGGACATATTTGGAAAACCAATGCGTGGCAGATTCCCATATGATGAAAACGGTAGAATGATTTTGGAGGAAGGTTACTTAGTCTACGAATGCAACCATAGGTGCAGATGTAATAACACCTGTCCAAACAGAATTTTGCAAAATGGAGTTCGTGTTAAATTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCTGTGAGGGCTGGTGAAGCCATCCTACGTGGCACATTTGTGTGTGAGTATGTTGGAGAGGTTCTAAATGAGCAGGAGGCACATAACAGGCGCAAGAGGCATGGCATAGAGGGTTGCAGATATTTCCTTGACATTGATGCTCGTATTAATGATATGAGCAGATTGATTGAAGGACAAGGCCGATATGTTATTGATGCTTCTAGATATGGAAATGTCTCGAGGTTCATCAATCATAGCTGCTCGCCCAATCTTATGAACCATCAAGTTCTTGTAGAAAGCATGGACAGTGAACGTACACATATTGGTTTTTATGCAAGTCGAGATATAGCATTGGGGGAAGAACTGACATGTGATTATCATTATGAGCTCCTGCCTGGGGAAGGTTCTCCTTGCCACTGTGGATCTTTGAAGTGCAGGGGACGCCTTCACTGA 4527 0.4241 MEVLPCAGVQYAAESDGPQQSSVTSFVYEGEPNCSENGERGELEDGQLNDSLLKMKGPQVERQGEVQQAVGELSVNPDWHCNGASNCECQAVDPKESSSFHAFVEDEMDEPCLISENPIPFVDTIESESPNNSRDGELPLAEPSWLEGDESVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHGRKKYFVIFFPHTRNYSWADMMLVRSINEFPQPIAYKTHQAGLKMVKDLSVARRFIMQKLAVGMLNIIDQFHLDALIEAARDVTFWKEFALEASRSKGYCDLGRMLRKLQNSIMQRYINANWLQHSFPIWIDRCQNASSAELIELLKEELFDSVLWNDIGTLWDEPVQPILGFEWKTWKHEVMKWFFYSPSLSSSKDMQQQQTSDGPFPSSLQVCRKRPKLEVRRAEMHASQVETKGSDHSIALETDLGFFNNQDTVKTLAAEACKQEELREAPLPTDSPGNLVNKWNDIVVEAATDSEFLHTKAMESTPTNEMIGPKSVEPGSKNRQCVAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSARAERPVSVDAPLCEGTTVLGTRCKHRALPGSSFCKKHRPHAETDFTPNLHQTSLKRKHEENNAGPESMICKDIVLADSQSPLQVIPVSAMDDDTFHGNSNSNGKPMRFRNDHNAMEEHCCIGSSPFDDKNPCLETPKRYFLYCEKHLPSWLKRARNGKSRIISKEVFAELLRDCCLQEQKVSLHKACELFYRLFKSILSLRNPVPKEVQFQWALTEASNDTSVREFFKKLVHSEKERIKVIWGFNDDKDAPSLMEEIPQLPPPVNDSFGNENVIECKICSAEFPDDQALGNHWMGNHKKESQWLFRGYACAICLDSFTNKKVLENHVQERHRVQFVEQCMLLQCIPCGSHFGNTEQLWLHVLSVHPVDFKASKAPDQQTLSTGEDSSIQIEAEQVTSASLENNLDNSGGSRKFICRFCGLKFDLLPDLGRHHQAAHMGPNLVSSRPSKRGVRYYAYRLKSGRLSRPRFKKSLVSASYRIRSRASANLKRRIQATKSLGIGGITIQPQVTETTNICKLAEYQCSAVAKILFSEIQKTKPRPNNHDILSISHSACCKVGLQAAVEEKFGTLPEKLYLKAAKLCSEHNILVSWHQEGFNCPRGCKALKDQPLLSHVASLPNRFVKQKALNMSDPAVDEWEVDEFHYTINSHHLKPGSLQKAVVVCDDISFGKESVPVICVVDQELQNSLHMCRSNEHAMNLSMPWESFTYITKPMLDQSLNLDSESLQLGCSCSYSTCSPETCAHVYLFDNDYEDARDIFGKPMRGRFPYDENGRMILEEGYLVYECNHRCRCNNTCPNRILQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYVGEVLNEQEAHNRRKRHGIEGCRYFLDIDARINDMSRLIEGQGRYVIDASRYGNVSRFINHSCSPNLMNHQVLVESMDSERTHIGFYASRDIALGEELTCDYHYELLPGEGSPCHCGSLKCRGRLH 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0364 1508 ProSiteProfiles Zinc finger C2H2 type domain profile. 856 879 IPR013087 -
Prci10g0364 1508 Pfam Pre-SET motif 1213 1345 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci10g0364 1508 ProSitePatterns Zinc finger C2H2 type domain signature. 858 879 IPR013087 -
Prci10g0364 1508 SMART preset_2 1210 1337 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci10g0364 1508 SUPERFAMILY SET domain 1203 1498 IPR046341 -
Prci10g0364 1508 ProSitePatterns Zinc finger C2H2 type domain signature. 824 845 IPR013087 -
Prci10g0364 1508 Pfam Zinc finger C2H2-type, 3 repeats 858 985 IPR040689 -
Prci10g0364 1508 ProSiteProfiles Zinc finger C2H2 type domain profile. 961 989 IPR013087 -
Prci10g0364 1508 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1508 - -
Prci10g0364 1508 ProSitePatterns Zinc finger C2H2 type domain signature. 892 913 IPR013087 -
Prci10g0364 1508 Gene3D Classic Zinc Finger 812 882 - -
Prci10g0364 1508 Pfam SET domain 1364 1484 IPR001214 GO:0005515
Prci10g0364 1508 ProSitePatterns Zinc finger C2H2 type domain signature. 963 984 IPR013087 -
Prci10g0364 1508 ProSiteProfiles Pre-SET domain profile. 1274 1350 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci10g0364 1508 SMART c2h2final6 961 984 IPR013087 -
Prci10g0364 1508 SMART c2h2final6 890 913 IPR013087 -
Prci10g0364 1508 SMART c2h2final6 822 845 IPR013087 -
Prci10g0364 1508 SMART c2h2final6 856 879 IPR013087 -
Prci10g0364 1508 ProSiteProfiles Post-SET domain profile. 1492 1508 IPR003616 -
Prci10g0364 1508 Gene3D SET domain 1202 1508 IPR046341 -
Prci10g0364 1508 ProSiteProfiles SET domain profile. 1353 1485 IPR001214 GO:0005515
Prci10g0364 1508 SMART set_7 1353 1491 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0364 Prci-Chr10 2471466 2483518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0364 135 1507 C2H2 Transcription Factor Family AT2G23740 51.116 0.0 1379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci10g0364 Pre-SET 1.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0364 - - gmx:100786757 2283.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0364 10 2471466 2483518 Prci10g0364 10 2471466 2483518 ECH