Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0353 ATGGGAATAACAGCGCCGGCACTTGCATCAATAATCTCTCACTCCAATTCCAAGACCCGCCATTCCTTTTCTACCTTGTACAAGAAGTCCGATTTTCCGAAGTCTATGTCCATGTCCCAAGATTACCATCAAGCAGGAATCTTCAACTTTTCGAATGGATTCGAGAGATCCACTGTAACTCAGCAACCTCATCAGCAGCCGCAGATTCGGAAGGACAAAATGAGGGTGCAAGGCTTCGACCCACCGCCACCGTTAGTGGGTATCGAGGAAGAGGAATCCGGAGGTCTTCCTGTGTACGAAAACGCCGGTATGTTATCGGAGATGTTTAGTTTCCCTCCCACAGGCGCCACCTCTTCTGAATTCTTGGAACAGCAACCCTTGACCGCGACCTATCGATCGTTCAGCAGGCCACAGGCTACTGCGATGGGCGGCGAGTGGTACGGAGACCGACAAGGCTTGATAAGTGGTATGGGAGATTCCAAGAATCACCACCACCACCGTCCTCATCAGCGTCAGATTTCAAGCATGAATGCGGATTCAGCGGCTGCCATGCAGCTTTTTCTCATGAACCCTCAACCCAGATCGCCTTCTCCTCCCCACAATCCTTCCACTAGCTCTTCTACCCTCAACATGTTGCTCCCCAATCCTTCCTCTTCTCTACAAGAATTCCCTGGCCCTGGAACTGGAGGGGGTTTTGGTCAATTCACCTGGGTTCCATTTTCCGAAGCAGGTTCTCAAGAAGTAGGAACCAACGCCAACTCGAATCAGGGTGAAATCGGCGGGGTTGTGGAAGGCCAAGGTCTTTCCTTATCGTTGTCGTCTTCATTGGAAGGAGCGAAAGCCGAGGAACTGAGGATGGGGGATAGTGGGTTTCTTAATTATTACAGTCAAAGTGCAGCAGGAGGGTCCTCATCTGCTCAGTATCCGTACAAGAATTTGGGCGGTCAAACTCAAACTCACGCATTGCATGTGCAAGGAGTGGCGCAGAACTACCAAGCTCATGCTGGTTTCGGGTCATCCTTGGGGATTGCCAATGTGCTGAGGAACTCCAAGTACGTGAAGCCTGCTAAAGAATTGCTTGAAGAATTCTGCAGCGTCGGGAGGGGTCAGTTCAAGAAGAACAAATTCAGCAGGCAGACCTCCGACCTTAATTCCAATTCCGGTGTTGGTGCCGCTGCTTCTTCGTCTTCCACAAAAGACCCCCCTCCTATGTCAGCCGCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCCATGCTTGACGAGGTGGACCGAAGATACAGTCACTACTGCGAACAAATGCAAATGGTGGTGAACTCATTTGACTTGGTGATTGGTTATGGGGCGGCGGTACCGTACACGGCGCTGGCGCAGAAAGCAATGTCGAGGCATTTCCGGTGCCTGAAGGATGCCATATCAGCACAACTGAAGCACAGTTGCGAGTTGCTGGGCGAGAAAGATGGGGTGGGTTCGTCGGGTTTGACTAAAGGTGAGACTCCAAGGCTTAAGCTGCTGGAGCAAAGCCTTAGGCAACAGAGAGCCTTCCACCAGATGGGCATGATGGAGCAGGAGGCTTGGAGACCCCAGCGCGGTCTTCCTGAACGTTCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTCCACCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCTCGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAACGCCAGAGTAAGGTTGTGGAAACCCATGGTAGAGGACATGTATCAACAAGAGCTTAAAGAGGCGGAGGATGCAGAAGACACAGAAATGAACCAAAGTGACAATAGTGGCAACATGGCTCAAACTCCAACGCCCACAACCACCGCAACCACAACTACGACCAATTCAACAGCAACAGCGCCACCGTTAACGCCACCAGCCAAAAGATACGACGTCAACGCCACCGAAAGAGACCATTCCCTCGCTGCAATCAACAGACAAGCCTTCTCGGAAAACCAATCAAAGCAGCAGTCGTCCGCCACCACCACCCTCGCCCCGAGCGCCACCGCCTCTGAGGTGGCGCCACCCGTGTCCCAATGCTTCGAATCAGACCTGCCCCCACACAGTCATGATGACACGTGTCGGCATGGCTGCATGGCTGCAGAACACTGCGGGACCGTCACAGCCACTGCTAACAATATTGGATCTACTCTCATTAGGTTCGGGACCACCGCCGGTGATGTGTCGCTCACCCTAGGGTTACGCCACGCCGGGAACATCCCTGACCCTTCTCCTTTCTCCGTTAGAGATTTTGGAGGCATTTGA 2325 0.5222 MGITAPALASIISHSNSKTRHSFSTLYKKSDFPKSMSMSQDYHQAGIFNFSNGFERSTVTQQPHQQPQIRKDKMRVQGFDPPPPLVGIEEEESGGLPVYENAGMLSEMFSFPPTGATSSEFLEQQPLTATYRSFSRPQATAMGGEWYGDRQGLISGMGDSKNHHHHRPHQRQISSMNADSAAAMQLFLMNPQPRSPSPPHNPSTSSSTLNMLLPNPSSSLQEFPGPGTGGGFGQFTWVPFSEAGSQEVGTNANSNQGEIGGVVEGQGLSLSLSSSLEGAKAEELRMGDSGFLNYYSQSAAGGSSSAQYPYKNLGGQTQTHALHVQGVAQNYQAHAGFGSSLGIANVLRNSKYVKPAKELLEEFCSVGRGQFKKNKFSRQTSDLNSNSGVGAAASSSSTKDPPPMSAADRIEHQRRKVKLLSMLDEVDRRYSHYCEQMQMVVNSFDLVIGYGAAVPYTALAQKAMSRHFRCLKDAISAQLKHSCELLGEKDGVGSSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEDAEDTEMNQSDNSGNMAQTPTPTTTATTTTTNSTATAPPLTPPAKRYDVNATERDHSLAAINRQAFSENQSKQQSSATTTLAPSATASEVAPPVSQCFESDLPPHSHDDTCRHGCMAAEHCGTVTATANNIGSTLIRFGTTAGDVSLTLGLRHAGNIPDPSPFSVRDFGGI 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0353 774 MobiDBLite consensus disorder prediction 377 402 - -
Prci10g0353 774 MobiDBLite consensus disorder prediction 602 649 - -
Prci10g0353 774 Pfam Associated with HOX 346 476 IPR006563 -
Prci10g0353 774 Coils Coil 592 612 - -
Prci10g0353 774 MobiDBLite consensus disorder prediction 154 175 - -
Prci10g0353 774 MobiDBLite consensus disorder prediction 201 224 - -
Prci10g0353 774 FunFam BEL1-like homeodomain protein 4 532 594 - -
Prci10g0353 774 MobiDBLite consensus disorder prediction 611 642 - -
Prci10g0353 774 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 186 614 - -
Prci10g0353 774 Pfam Homeobox KN domain 546 585 IPR008422 GO:0003677|GO:0006355
Prci10g0353 774 CDD homeodomain 529 590 IPR001356 GO:0003677
Prci10g0353 774 MobiDBLite consensus disorder prediction 189 228 - -
Prci10g0353 774 MobiDBLite consensus disorder prediction 377 408 - -
Prci10g0353 774 Gene3D - 532 594 - -
Prci10g0353 774 SMART prehox3 341 477 IPR006563 -
Prci10g0353 774 SMART HOX_1 529 593 IPR001356 GO:0003677
Prci10g0353 774 ProSiteProfiles 'Homeobox' domain profile. 526 589 IPR001356 GO:0003677
Prci10g0353 774 SUPERFAMILY Homeodomain-like 531 596 IPR009057 -
Prci10g0353 774 MobiDBLite consensus disorder prediction 669 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0353 Prci-Chr10 2432149 2439157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0353 37 576 Homeobox Transcription Factor Family AT4G36870 51.562 1.55e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Prci10g0353 POX 1.2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0353 - - pcin:129311153 919.457