Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0351 ATGCGTCCATTGTTCCTCATCCCAGTCTTCTCTTTGGCTCTGTTCTGCGGCTTCCCTCTGAATCTGGGGCAGCAACCTTATATTGGCTTGGGCACAGTAGCCTGTCCTAGAAAGGGCAATTCAAAATCTATTCGTGGTTACACTTGCAACGGCCTTGCTCACAGCTGCCAAGCTTACCTCACCTTCAGATCTCAACCCCTTTACTACTCCGTTTCCACAATTTCTGCTTTGCTTGGCTCCGACCCTTCTCAGCTCTCCGAGATCAACTCGGTTTCTCTGAATGCCACTTTTGCAGCTAATCATCTGGTGATTGTCCCCGTTAACTGCTCTTGTGCAAGTGACTATTATCAGACTAACACGACCTACACCGTCCACAACACAGAAACATATTTCTTGATTGCTAACAACACTTTCCAAGGTCTCTCAACCTGTCAAGCTCTCATGGATCAAAACGACATTCCTGGAGATTTATTCCCCGGTACAAAACTTAAGGTCCCTCTTAGATGCGCTTGTCCCACAAAAAATCAAACTGACAAGGGTGTCAAGTACCTATTGAGTTACTTGGTAGACCCGGGTGATTCTGTTTCTGTCATCAGTGAAAGATTTGGTGCACTCACTGATCTCACTCTCGAATCAAATAGCCTTTCTTATCAAGACTTTATATATCCCTATACCACACTTTTAGTGCCCCTTCAACATGAACCCAACATCACTCGAATCGTGGTGTCTCCTCCTCCACCATCTCCTTCATCCCCACCTTCGTCTTCTACCTCAGGCGGCAGCTCAAATAAGACCTGGATATATGCAGTTGTTGGAGCTGTCGGAGGTCTTGTCTTGATATCATTCCTCCTCGGTATCCTTGTTTTCTGTAAACGGCGTCCCAGAAGCGAAAAGAAAGATGATTCTGCAATAGTGTCCGAGAGTTTCGAGGCAACAGAGAAACCAGAAGGGAAAAAGGTCGGGGAAGAGTCTGAAACGTTGTTGGAGATAATATCCGGCATAGCCCAAACTTTCAAAGTGTACGGATTTAAGGAACTACAGCGTGCAACGGATAATTTTAATTCAAGCTGCTGCATCAAAGGGAGTGTTTATCGTGCTATGATTAATGGTGATTTGGCCGCTATTAAAAAGATGGATGGCGATGTGTCGAAAGAGATCGCAATTCTGAGCAAAGTCAACCATTCTAACGTGATACGCCTTTCGGGCGTCAGCTTCAACGAGGGCCATTGGTATCTGGTTTACGAGTATGCCGCTAATGGATCCTTGACTGATTGGATCTACGTCAACAACTTGGACGGAAAGTTTTTGACTTGGAGTCAGAGAATGCAGATAGCATTGGATGTGGCCACAGGACTTGACTATCTCCATAGTTTCACCTCTCCTCCTCTTATCCACAAGGATCTCAAGAGTGATAACATCCTTCTCGACACTGATTTGAGGGCCAAGATTGCAAACCTGGGGCTTGCAAGGTCCGTAGAAGGAGAGGATGATCAATTCCCTGTGACGAGGCATATTGTTGGAACAAGAGGCTACATGGCTCCCGAGTATCTAGAAAATGGCATTATCTCTACAAAGCAAGATGTTTATGCATTTGGGGCTGTGATGCTGGAAACGCTAAGTGGAAAAGAAGTTGCTGCTATTCATTCAGAAGATCAAGGGAGTTTATCAGATGTCTTAAGTGTCATTCTTGATGGGGACCGAGGGGAGGAGAAGCTGAGGGATTTTATGGATCCTTGCCTGAATGGAAACTTTCCATTGGAACTTGCTGTGTTTGTGCTGAGAATGATTGATAATTGCTTGAAGAAAGATCCAGCGAGTCGCCCTGCCATGCATGAGATAGTGTCGTCTCTTTCTGCAACGTTGAATTCTTCATTGGCCTGGGTCTCTGGGGACTTGAGCTTTAGCAGGAGCTCTTAA 1917 0.4559 MRPLFLIPVFSLALFCGFPLNLGQQPYIGLGTVACPRKGNSKSIRGYTCNGLAHSCQAYLTFRSQPLYYSVSTISALLGSDPSQLSEINSVSLNATFAANHLVIVPVNCSCASDYYQTNTTYTVHNTETYFLIANNTFQGLSTCQALMDQNDIPGDLFPGTKLKVPLRCACPTKNQTDKGVKYLLSYLVDPGDSVSVISERFGALTDLTLESNSLSYQDFIYPYTTLLVPLQHEPNITRIVVSPPPPSPSSPPSSSTSGGSSNKTWIYAVVGAVGGLVLISFLLGILVFCKRRPRSEKKDDSAIVSESFEATEKPEGKKVGEESETLLEIISGIAQTFKVYGFKELQRATDNFNSSCCIKGSVYRAMINGDLAAIKKMDGDVSKEIAILSKVNHSNVIRLSGVSFNEGHWYLVYEYAANGSLTDWIYVNNLDGKFLTWSQRMQIALDVATGLDYLHSFTSPPLIHKDLKSDNILLDTDLRAKIANLGLARSVEGEDDQFPVTRHIVGTRGYMAPEYLENGIISTKQDVYAFGAVMLETLSGKEVAAIHSEDQGSLSDVLSVILDGDRGEEKLRDFMDPCLNGNFPLELAVFVLRMIDNCLKKDPASRPAMHEIVSSLSATLNSSLAWVSGDLSFSRSS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0351 638 SMART LysM_2 186 230 IPR018392 -
Prci10g0351 638 SMART LysM_2 121 166 IPR018392 -
Prci10g0351 638 Gene3D Transferase(Phosphotransferase) domain 1 418 628 - -
Prci10g0351 638 SUPERFAMILY Protein kinase-like (PK-like) 337 617 IPR011009 -
Prci10g0351 638 ProSiteProfiles Protein kinase domain profile. 314 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0351 638 Gene3D LysM domain 185 239 IPR036779 -
Prci10g0351 638 Gene3D LysM domain 116 179 IPR036779 -
Prci10g0351 638 ProSiteProfiles LysM domain profile. 185 229 IPR018392 -
Prci10g0351 638 MobiDBLite consensus disorder prediction 239 261 - -
Prci10g0351 638 Gene3D Phosphorylase Kinase; domain 1 328 416 - -
Prci10g0351 638 FunFam PTI1-like tyrosine-protein kinase 3 417 630 - -
Prci10g0351 638 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Prci10g0351 638 Pfam Protein kinase domain 374 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0351 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Prci10g0351 638 Pfam LysM domain 122 166 IPR018392 -
Prci10g0351 638 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0351 638 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0351 Prci-Chr10 2401027 2403301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0351 5 627 Receptor kinase-like Gene Family AT2G23770 43.533 1.38e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci10g0351 Pkinase 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0351 - - gmx:100815842 789.26