Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci10g0351 | ATGCGTCCATTGTTCCTCATCCCAGTCTTCTCTTTGGCTCTGTTCTGCGGCTTCCCTCTGAATCTGGGGCAGCAACCTTATATTGGCTTGGGCACAGTAGCCTGTCCTAGAAAGGGCAATTCAAAATCTATTCGTGGTTACACTTGCAACGGCCTTGCTCACAGCTGCCAAGCTTACCTCACCTTCAGATCTCAACCCCTTTACTACTCCGTTTCCACAATTTCTGCTTTGCTTGGCTCCGACCCTTCTCAGCTCTCCGAGATCAACTCGGTTTCTCTGAATGCCACTTTTGCAGCTAATCATCTGGTGATTGTCCCCGTTAACTGCTCTTGTGCAAGTGACTATTATCAGACTAACACGACCTACACCGTCCACAACACAGAAACATATTTCTTGATTGCTAACAACACTTTCCAAGGTCTCTCAACCTGTCAAGCTCTCATGGATCAAAACGACATTCCTGGAGATTTATTCCCCGGTACAAAACTTAAGGTCCCTCTTAGATGCGCTTGTCCCACAAAAAATCAAACTGACAAGGGTGTCAAGTACCTATTGAGTTACTTGGTAGACCCGGGTGATTCTGTTTCTGTCATCAGTGAAAGATTTGGTGCACTCACTGATCTCACTCTCGAATCAAATAGCCTTTCTTATCAAGACTTTATATATCCCTATACCACACTTTTAGTGCCCCTTCAACATGAACCCAACATCACTCGAATCGTGGTGTCTCCTCCTCCACCATCTCCTTCATCCCCACCTTCGTCTTCTACCTCAGGCGGCAGCTCAAATAAGACCTGGATATATGCAGTTGTTGGAGCTGTCGGAGGTCTTGTCTTGATATCATTCCTCCTCGGTATCCTTGTTTTCTGTAAACGGCGTCCCAGAAGCGAAAAGAAAGATGATTCTGCAATAGTGTCCGAGAGTTTCGAGGCAACAGAGAAACCAGAAGGGAAAAAGGTCGGGGAAGAGTCTGAAACGTTGTTGGAGATAATATCCGGCATAGCCCAAACTTTCAAAGTGTACGGATTTAAGGAACTACAGCGTGCAACGGATAATTTTAATTCAAGCTGCTGCATCAAAGGGAGTGTTTATCGTGCTATGATTAATGGTGATTTGGCCGCTATTAAAAAGATGGATGGCGATGTGTCGAAAGAGATCGCAATTCTGAGCAAAGTCAACCATTCTAACGTGATACGCCTTTCGGGCGTCAGCTTCAACGAGGGCCATTGGTATCTGGTTTACGAGTATGCCGCTAATGGATCCTTGACTGATTGGATCTACGTCAACAACTTGGACGGAAAGTTTTTGACTTGGAGTCAGAGAATGCAGATAGCATTGGATGTGGCCACAGGACTTGACTATCTCCATAGTTTCACCTCTCCTCCTCTTATCCACAAGGATCTCAAGAGTGATAACATCCTTCTCGACACTGATTTGAGGGCCAAGATTGCAAACCTGGGGCTTGCAAGGTCCGTAGAAGGAGAGGATGATCAATTCCCTGTGACGAGGCATATTGTTGGAACAAGAGGCTACATGGCTCCCGAGTATCTAGAAAATGGCATTATCTCTACAAAGCAAGATGTTTATGCATTTGGGGCTGTGATGCTGGAAACGCTAAGTGGAAAAGAAGTTGCTGCTATTCATTCAGAAGATCAAGGGAGTTTATCAGATGTCTTAAGTGTCATTCTTGATGGGGACCGAGGGGAGGAGAAGCTGAGGGATTTTATGGATCCTTGCCTGAATGGAAACTTTCCATTGGAACTTGCTGTGTTTGTGCTGAGAATGATTGATAATTGCTTGAAGAAAGATCCAGCGAGTCGCCCTGCCATGCATGAGATAGTGTCGTCTCTTTCTGCAACGTTGAATTCTTCATTGGCCTGGGTCTCTGGGGACTTGAGCTTTAGCAGGAGCTCTTAA | 1917 | 0.4559 | MRPLFLIPVFSLALFCGFPLNLGQQPYIGLGTVACPRKGNSKSIRGYTCNGLAHSCQAYLTFRSQPLYYSVSTISALLGSDPSQLSEINSVSLNATFAANHLVIVPVNCSCASDYYQTNTTYTVHNTETYFLIANNTFQGLSTCQALMDQNDIPGDLFPGTKLKVPLRCACPTKNQTDKGVKYLLSYLVDPGDSVSVISERFGALTDLTLESNSLSYQDFIYPYTTLLVPLQHEPNITRIVVSPPPPSPSSPPSSSTSGGSSNKTWIYAVVGAVGGLVLISFLLGILVFCKRRPRSEKKDDSAIVSESFEATEKPEGKKVGEESETLLEIISGIAQTFKVYGFKELQRATDNFNSSCCIKGSVYRAMINGDLAAIKKMDGDVSKEIAILSKVNHSNVIRLSGVSFNEGHWYLVYEYAANGSLTDWIYVNNLDGKFLTWSQRMQIALDVATGLDYLHSFTSPPLIHKDLKSDNILLDTDLRAKIANLGLARSVEGEDDQFPVTRHIVGTRGYMAPEYLENGIISTKQDVYAFGAVMLETLSGKEVAAIHSEDQGSLSDVLSVILDGDRGEEKLRDFMDPCLNGNFPLELAVFVLRMIDNCLKKDPASRPAMHEIVSSLSATLNSSLAWVSGDLSFSRSS | 638 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci10g0351 | 638 | SMART | LysM_2 | 186 | 230 | IPR018392 | - | |
Prci10g0351 | 638 | SMART | LysM_2 | 121 | 166 | IPR018392 | - | |
Prci10g0351 | 638 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 628 | - | - | |
Prci10g0351 | 638 | SUPERFAMILY | Protein kinase-like (PK-like) | 337 | 617 | IPR011009 | - | |
Prci10g0351 | 638 | ProSiteProfiles | Protein kinase domain profile. | 314 | 621 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci10g0351 | 638 | Gene3D | LysM domain | 185 | 239 | IPR036779 | - | |
Prci10g0351 | 638 | Gene3D | LysM domain | 116 | 179 | IPR036779 | - | |
Prci10g0351 | 638 | ProSiteProfiles | LysM domain profile. | 185 | 229 | IPR018392 | - | |
Prci10g0351 | 638 | MobiDBLite | consensus disorder prediction | 239 | 261 | - | - | |
Prci10g0351 | 638 | Gene3D | Phosphorylase Kinase; domain 1 | 328 | 416 | - | - | |
Prci10g0351 | 638 | FunFam | PTI1-like tyrosine-protein kinase 3 | 417 | 630 | - | - | |
Prci10g0351 | 638 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 35 | - | - | |
Prci10g0351 | 638 | Pfam | Protein kinase domain | 374 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci10g0351 | 638 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 463 | 475 | IPR008271 | GO:0004672|GO:0006468 | |
Prci10g0351 | 638 | Pfam | LysM domain | 122 | 166 | IPR018392 | - | |
Prci10g0351 | 638 | SMART | serkin_6 | 353 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci10g0351 | 638 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 10 | 629 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci10g0351 | Prci-Chr10 | 2401027 | 2403301 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci10g0351 | 5 | 627 | Receptor kinase-like Gene Family | AT2G23770 | 43.533 | 1.38e-170 | 498 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Prci10g0351 | Pkinase | 1.9e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci10g0351 | - | - | gmx:100815842 | 789.26 |