Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0319 ATGCCAGTTGATTTAGACAATTCTTCAACAGCTTCAGGGGAAGCTAGCGTCTCTTCCTCTGGCAATCAGACTGCTCCACCAAAGTCCACTGTTAAGAAGAAGAGAAATCTTCCCGGAATGCCAGATCCAGACGCGGAGGTGATTGCACTGTCTCCAAAAACCCTGTTAGCGACGAACCGATTCGTGTGTGAAATCTGCAACAAGGGATTTCAGAGGGATCAGAATCTCCAGCTCCATCGACGGGGTCATAATCTGCCATGGAAGCTGAGGCAGAGGTCCAGCAAGGAAGTGAGGAAAAGAGTCTATGTGTGTCCCGAGCCAACCTGCGTCCATCATGATCCCTCCAGAGCTCTGGGTGATCTCACCGGAATAAAGAAGCATTTCTGTAGAAAACACGGTGAGAAGAAGTGGAAATGTGACAAATGTTCAAAGAAATATGCAGTTCAGTCAGATTGGAAGGCTCACTCGAAGATTTGTGGTACCAGAGAGTACAAATGCGATTGTGGGACTTTGTTTTCGAGGAGGGATAGTTTCATCACGCACAGGGCATTCTGTGATGCGTTGGCAGAGGAGAGTGCAAGAAATCAGACCCAGCCTCAGACTCAAACCCAGACTCAAGCTCCTGAGAAGCCTAATTCAGAGTCGGACCCAAAAATTATAAGCGGCGATTCCTCCCCAACAGTTCCGGCGCCGGCGCCACCGCCACCGCCTACAGCCCCGCCTCCAGCTCCGAAGTCAAATAGCGTCATGCCATCTGCCTTGCAGACGAAAAATCCAGAGTTGCCCGAAAATCCTTCACAAATCATTGAGGAACCACAGGCCTCTGCTGCTCTAAATGGGAGCTGCAGCAGCAGTACTAGCTCAACCAGTAATGGTGGTACTAGCAGTACTGTATTTGCAAGCTTGTTTGCTTCCTCAACTGCATCCGGAAGCCTGCAACCTCCTCAACCTCAAGCTCCTGCGTTTATTAGGGCCATGGCTCGTCCGGATCGTCCTGCAGAGCTCTCAGGGCCTTCATCTTCGGAGCCCATCTCTCTCTGCCTGTCCCCTAGCAATGGGTCGTCAATCTTTGGAACAGGAGGGCAAGAACGTCGTCAGTATGCCCCACCACCACAGCCAGCTATGTCCGCCACTGCGCTACTGCAGAAAGCTGCTCAGATGGGTGCAGCAGCAACAAATGCATCGCTGCTTCGTGGGTTCGGCATAGTCTCATCTTCCTCATCATCTTCATCATTAAGCTTGCTAGATGACATGCCATGGGGTCAGAGGCAAGTAGAACCGGAGAATGCTTCAGTTCATGCAGGGCTCGGGCTTGGACTCCCATGTGATGGTGGCTCTGGATTGAAGGAATTAATGATGGGGACGCCCTCTGTGTTCGGTCCCAAGCACACGACCCTGGACTTTCTGGGATTGGGGATGGCTGCGGGTGGTGGCACCCCTAGTGGAGGCTTATCAGCACTAATCACTTCCATTGGTAGTGGTCTGGACGTTTCTGCCACAGCAAGGCCCTTCGGTAGTGGAGAGATTTCAGGTAAAGATATTGGGAGGAGCTCGTGA 1557 0.5183 MPVDLDNSSTASGEASVSSSGNQTAPPKSTVKKKRNLPGMPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSSKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEESARNQTQPQTQTQTQAPEKPNSESDPKIISGDSSPTVPAPAPPPPPTAPPPAPKSNSVMPSALQTKNPELPENPSQIIEEPQASAALNGSCSSSTSSTSNGGTSSTVFASLFASSTASGSLQPPQPQAPAFIRAMARPDRPAELSGPSSSEPISLCLSPSNGSSIFGTGGQERRQYAPPPQPAMSATALLQKAAQMGAAATNASLLRGFGIVSSSSSSSSLSLLDDMPWGQRQVEPENASVHAGLGLGLPCDGGSGLKELMMGTPSVFGPKHTTLDFLGLGMAAGGGTPSGGLSALITSIGSGLDVSATARPFGSGEISGKDIGRSS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0319 518 Gene3D Classic Zinc Finger 41 107 - -
Prci10g0319 518 MobiDBLite consensus disorder prediction 1 44 - -
Prci10g0319 518 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Prci10g0319 518 MobiDBLite consensus disorder prediction 191 265 - -
Prci10g0319 518 MobiDBLite consensus disorder prediction 227 247 - -
Prci10g0319 518 SMART c2h2final6 61 83 IPR013087 -
Prci10g0319 518 SMART c2h2final6 102 132 IPR013087 -
Prci10g0319 518 SMART c2h2final6 137 157 IPR013087 -
Prci10g0319 518 Gene3D Classic Zinc Finger 115 196 - -
Prci10g0319 518 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Prci10g0319 518 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Prci10g0319 518 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 16 477 IPR031140 -
Prci10g0319 518 FunFam protein indeterminate-domain 12-like 40 108 - -
Prci10g0319 518 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
Prci10g0319 518 MobiDBLite consensus disorder prediction 1 30 - -
Prci10g0319 518 MobiDBLite consensus disorder prediction 191 222 - -
Prci10g0319 518 MobiDBLite consensus disorder prediction 248 265 - -
Prci10g0319 518 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0319 Prci-Chr10 2167609 2171214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0319 1 518 IDZ Gene Family AT5G66730 61.940 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci10g0319 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0319 K25869 - tcc:18610967 737.258