Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0305 ATGTCAAAAGCAGTCGGACCAGTGCTTGGCATAGCAGCAATTGTTATTATTGCCATCGCTTTCCGTGTAATTTGCACTTCCAAGAAGAGAAAGAAGGCGCAAAATTATGAAGATCCTCATCTTGCAGCAGCACAAGGTGGTGAAAATGACAACAATGCACAGCCATCCGAGAGACAAAAAGGTTCGGAACAAGGATGTGACGAACTGAAAGTGGTAAAAGAGGTGAGCGAGGGTACATTCACGTACGAGGAGTTGGCATTGGCAACGAAAGGATTTGCGAAAGGGAATCTGATAGGAGAAGGAGGACTTGGTTACGTGCATAAAGGTGTTCTGCCTAATGGAAAGACAATTGCTGTTAAAACCCTCAAAGAAGGAGGTTCCCATGGCCTTGAGCCTTTCCAATCGGAGAGTGAGGCCATCGCTCGTGTTCATCATCGACATCTCGTGTTGCTCCTCGGATTTTGTATTTCTCGCGAAAAAAGAATGCTCGTTTATGAATTTGTTCCTTGTTATAATTTGGAACATCATCTTCATGGAAAAGGTGTGCCACTCGTGAGTTGGCCTCGCAGGATGCAGATTGCAGTTGGAATTGCCAGAGGGCTTACTTACCTTCATGAAGATTGTGATCCTCGGATAGTTCATCGTAATATCAAAGCCGCTAATGTTCTCATTGACGAGAGCTTTGAAGCCAAGGTGGCGGATTTTGGTTTGTCTAAGGTGATATCCGATAACAACACCCATGTCTCAACTCGTGTCATGGGAGGATTGGGGTACCTGGCTCCAGAATATGCATCGACTGGAAAATTAACAGAGAAATCAGATGTTTTCTCATTCGGGGTATTGCTATTAGAAATTTTAACTGGGAAACGGCCAATGGATCTCTCTCATGCCCTGGATGATACCTTGGTGGACTTGGCTCGACCACTACTGAATCGAGGGTTGGAAGATGGAAACTTGGGAGAGTTAGTGGACGCATTTTTGGAAGGGAACTATGATCATCAACAAGTTGCTCGTGTGGCTGCTTGTGCTGCGGCCAGCATTCGTCATTCTCCCAAAAAACGTCCCAACATGAGACAGATTCTATTAGCTCTGGAAGGAAACGCATCATCGGAGGATTTGATTGATGCGGGTATACCTCCTCATGATTTTCATTAG 1155 0.4519 MSKAVGPVLGIAAIVIIAIAFRVICTSKKRKKAQNYEDPHLAAAQGGENDNNAQPSERQKGSEQGCDELKVVKEVSEGTFTYEELALATKGFAKGNLIGEGGLGYVHKGVLPNGKTIAVKTLKEGGSHGLEPFQSESEAIARVHHRHLVLLLGFCISREKRMLVYEFVPCYNLEHHLHGKGVPLVSWPRRMQIAVGIARGLTYLHEDCDPRIVHRNIKAANVLIDESFEAKVADFGLSKVISDNNTHVSTRVMGGLGYLAPEYASTGKLTEKSDVFSFGVLLLEILTGKRPMDLSHALDDTLVDLARPLLNRGLEDGNLGELVDAFLEGNYDHQQVARVAACAAASIRHSPKKRPNMRQILLALEGNASSEDLIDAGIPPHDFH 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0305 384 Gene3D Phosphorylase Kinase; domain 1 52 167 - -
Prci10g0305 384 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 373 IPR047117 -
Prci10g0305 384 FunFam Proline-rich receptor-like protein kinase PERK4 168 374 - -
Prci10g0305 384 ProSiteProfiles Protein kinase domain profile. 92 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0305 384 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 63 167 - -
Prci10g0305 384 Pfam Protein tyrosine and serine/threonine kinase 95 360 IPR001245 GO:0004672|GO:0006468
Prci10g0305 384 SUPERFAMILY Protein kinase-like (PK-like) 76 364 IPR011009 -
Prci10g0305 384 CDD STKc_IRAK 98 366 - -
Prci10g0305 384 Gene3D Transferase(Phosphotransferase) domain 1 170 376 - -
Prci10g0305 384 MobiDBLite consensus disorder prediction 41 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0305 Prci-Chr10 2027111 2031347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0305 8 373 Trihelix Transcription Factor Family AT1G70460 46.250 7.76e-117 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci10g0305 PK_Tyr_Ser-Thr 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0305 - - pcin:129322297 739.954