Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0304 ATGGGAGACTACAACGATGCTGCTTTCATGCGCAACCAAAACGCCGCCGTGCAGGCTCGGACCAAAGCTCAGAACCGTGCCAACGTCCTCCAGCTCAAGCTGATCGGACAGAGTCATCCAACTGGTCTCACGGCTAACCTTTTGAAGCTGTTTGAGCCTAGACCTCCTTTGGAGTATAAACCACCTCCAGAAAAAAGGAAATGCCCACCACTAACAGGGATGGCACAGTTTGTGGGTAAGTTTGCTGAACCTGGAGATCCCGAATATTCTCCTCCTGTCCAAGAAGCTGAAACTCCTATGCAAAGAAGAGCTAGGATACACAAGCTAAGATTAGAGAAGGGAGCAGCAAAGGCTGCTGAAGAGCTAGAAAAATATGATCCACATAATGACCCAAATATTTCAGGAGATCCCTACAAGACCTTGTTTGTGGCTAGACTTAGTTATGAGACCACCGAGAGCAGAATCAAAAGGGAGTTTGAGTCATATGGTCCAATCAAACGGGTTCGATTGGTTACAGACAAAGACACAAATAAGCCCAAGGGTTATGCATTCATTGAGTACCTGCACACAAGGGACATGAAAGCTGCTTATAAACAAGCTGATGGTAGGAAAATTGAGGGTAGAAGGGTACTTGTGGATGTTGAACGTGGAAGGACTGTTCCTAATTGGCGACCTCGCCGACTAGGTGGTGGGCTTGGTACTACTAGAGTTGGGGGTGAAGAAGTTAATCAGCGGAACTCTGGGAGGGAACAACTGCAATCTGGACCCTCTCGATCTGAAGAACCAAAAGTGCGGGAGGAACGACAGGTTGATCGGGATAGAGAAAAATCTCGTGAAAGAGGTAGGGACAGAGATAGAGAACGGGAGCGATCACGAGAACGCTCTCATGATAGAAGCCGTACTCGGGATCACAGGGAGGATAGACATCACAGAGATCGGGATAGGACTAGAGATAGGGAAAGGGAAAGAGATCGTGGTCGTGATCGAGATAGGGATCGTGGTCGTGATCGGGAGCGAGGACGTGATCGTGATAGGGAGAGGGATCGTGATCGTCATCGTGAAAGGGATAGGGACTATGAAGTTGGGGACCTTGAACGTGGACGCTCGCACGATAGGGAGTCTGATTATGATCGTTTGGATTCTAAAAATGAGAGGGACCGGCATGGGGAAAGGGAGCGAGACTATGAACCCGAGGATGATCGTCCATGGTACAATCAACTTGAGCATGGACATAGGCATGCAGATCCTGATGGTGATGCTGAGGAGTTCAACCACCATGAGCACCATCAAGCACGAGGGCATTATGATCGTGGAGAAGGTGACCATTATGATCAATATCCTGACCGTGATAGGTTGGAGGATGACTACCACAACGAACATACAACATCTGAATCTCGTGACCGGGAGAGAAATCGTGATGTGGATCATGAATATCATCGGTCAGAGAGGTCTCATTCTCGAGAGTACGAGTACTAG 1476 0.4851 MGDYNDAAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLTGMAQFVGKFAEPGDPEYSPPVQEAETPMQRRARIHKLRLEKGAAKAAEELEKYDPHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGPIKRVRLVTDKDTNKPKGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRNSGREQLQSGPSRSEEPKVREERQVDRDREKSRERGRDRDRERERSRERSHDRSRTRDHREDRHHRDRDRTRDRERERDRGRDRDRDRGRDRERGRDRDRERDRDRHRERDRDYEVGDLERGRSHDRESDYDRLDSKNERDRHGERERDYEPEDDRPWYNQLEHGHRHADPDGDAEEFNHHEHHQARGHYDRGEGDHYDQYPDRDRLEDDYHNEHTTSESRDRERNRDVDHEYHRSERSHSREYEY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0304 491 MobiDBLite consensus disorder prediction 259 491 - -
Prci10g0304 491 Pfam U1 small nuclear ribonucleoprotein of 70kDa MW N terminal 42 130 IPR022023 -
Prci10g0304 491 FunFam U1 small nuclear ribonucleoprotein 70 kDa 126 251 - -
Prci10g0304 491 Gene3D - 126 251 IPR012677 -
Prci10g0304 491 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 139 217 IPR000504 GO:0003723
Prci10g0304 491 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 141 210 IPR000504 GO:0003723
Prci10g0304 491 SUPERFAMILY RNA-binding domain, RBD 127 239 IPR035979 GO:0003676
Prci10g0304 491 CDD RRM_snRNP70 138 228 IPR034143 GO:0030619
Prci10g0304 491 MobiDBLite consensus disorder prediction 221 491 - -
Prci10g0304 491 MobiDBLite consensus disorder prediction 239 258 - -
Prci10g0304 491 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 60 291 - -
Prci10g0304 491 SMART rrm1_1 140 213 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0304 141 187 C2H2 Transcription Factor Family AT2G19380 42.553 1.81e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0304 K11093 - qsa:O6P43_033721 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0304 10 2005257 2011096 Prci10g0304 10 2005257 2011096 ECH