Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0301 ATGCTCATGTTTGATTCACACATCAATCTATGTATTCTTTCTCTCGTTGTTCTAGCTCTCCCCCTCGTCTTTCTCTACAGAAGAAAGCAACCCAAGCTTAATCTTCCCCCAGGCCAAACGGGATGGCCTCTTGTTGGAGAAACGATTGGGTTTTTGAAGCCATACCCTGCCACGACAATAGGAAAGTTCATGGAACAGCATATAGCAAGGTATGGTAAAGTCTTCAAGTCGACATTGTTTGGGGAGCCAGCGATTGTTTCCGCTGATCCAGAGCTCAACAAGTTCATATTCAATAACGAAGGTAAGTTGTTCGAATGCAGCTACCCAAAAAGCATTGGTGGAATACTGGGAAAATGGTCTATGCTGGTCGTAGTGGGTGACATGCACAGAGACATGAGAGCTATAGCGCTCAACTTTATGAGCAGTGCCATGCTCAGAACAAGCATGTTGAAAGACGTGGAGACGCATGCCCTGCTTGTTCTGAACTCGTGGAAGCAGAATTTTAAGTTTTCTGCTCAGGAAGAGGCTAAGAAGTTCACCTTCAATTTGATGGTGAAGAATATCTTGAGCCTGGAGCCTGATAATCCTGAGGCAGAGGCGTTGAAGAAAGCGTACGCCACTTTCATGAAAGGGGTAGTTTCGGCACCTTTGAACTTTCCGGGAACGTCGTACCGGAAGGCGTTACAGTCTAGGTTCACCATACTGAAGTTCATTGAGAAGAAAATGGAAGAAAGAAACCAAAACATGAAAGAGGGTAGTGAAGGCTTGGACAATGACCTTCTAAACTGGGTTTTAAGGAATTCAAATCTTACAGCAGAACAAATTCTTGACCTGATTCTGAGCTTGCTTTTTGCTGGACATGAAACTTCATCCGTAGCCATATCTCTTGCTCTTCACTTTTTACCAGGTTGTCCTCGAGCTGTCCAACAGTTAAGGGAAGAACACGGAGAAATTGCCAGAGCCAAAAGGGAAGCAGGTGAAGTGGAATTGACTTGGGACGACTACAGGCGGATGGAGTTTACTCACTGGGTCGTCAATGAAACACTTCGGCTTGGAAATGTTGTCAGGTTTCTTCACAGGAAGGCTATCAAGGATATCCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTTCCGGTACTTGCAGCCGTGCATCTGGATCCTTCACATTTTGACCACCCTCAACTCTTCGATCCATGGAGATGGCAGAACAATGGGAGCCGTGGGGGCAGCGCAGGCGCTAGTAATAATGTCAACTTCATGCCGTTCGGGGGAGGTGGGAGATACTGCGCGGGATCAGAGTTAGCGAAACTAGAAATAGCGATTTTCATCCACCATCTCATTCTCAACTATCAATGGGACTTGGCTGAAGAGGATCAAGCTTTTGTATACCCTTTCGTTGATTTTCCCAAAGGCTTGCCCATCAGAGTCCAGCGTAACGTCTATCTTTGA 1458 0.4609 MLMFDSHINLCILSLVVLALPLVFLYRRKQPKLNLPPGQTGWPLVGETIGFLKPYPATTIGKFMEQHIARYGKVFKSTLFGEPAIVSADPELNKFIFNNEGKLFECSYPKSIGGILGKWSMLVVVGDMHRDMRAIALNFMSSAMLRTSMLKDVETHALLVLNSWKQNFKFSAQEEAKKFTFNLMVKNILSLEPDNPEAEALKKAYATFMKGVVSAPLNFPGTSYRKALQSRFTILKFIEKKMEERNQNMKEGSEGLDNDLLNWVLRNSNLTAEQILDLILSLLFAGHETSSVAISLALHFLPGCPRAVQQLREEHGEIARAKREAGEVELTWDDYRRMEFTHWVVNETLRLGNVVRFLHRKAIKDIRYKGYDIPRGWKVLPVLAAVHLDPSHFDHPQLFDPWRWQNNGSRGGSAGASNNVNFMPFGGGGRYCAGSELAKLEIAIFIHHLILNYQWDLAEEDQAFVYPFVDFPKGLPIRVQRNVYL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0301 485 Gene3D Cytochrome P450 26 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 CDD CYP90-like 67 481 - -
Prci10g0301 485 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 SUPERFAMILY Cytochrome P450 26 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 Pfam Cytochrome P450 36 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PANTHER CYTOCHROME P450 26 31 460 - -
Prci10g0301 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Prci10g0301 485 FunFam Cytochrome P450 90B1 25 481 - -
Prci10g0301 485 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0301 485 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0301 Prci-Chr10 1973969 1978313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0301 27 406 Cytochrome P450 AT3G50660 67.413 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0301 K09587 - gmx:100802498 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0301 10 1973969 1978313 Prci5g0115 5 1780461 1784813 CCT
Prci10g0301 10 1973969 1978313 Prci10g0301 10 1973969 1978313 ECH