Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0286 ATGGAACTGAGTGGCTTAGATAAGGAAATAGAGATGCCATTACCAACCACTTCAGGTTGTAATCCCTCCAACAGGGACTCATCTTCTTCTCCAACTCTAGCTTCAACAGTAGGGGAGACGAGTAGTGATCAACCCCTTCAAACTTCAGACCACTATCATCCTCATCATCCTCCTTCTCTGCCATCGAACCCACTCCAGCAATTTCAGAGAAACACAAGAGATCCAGATCCGCCGAGCGTAACAGCGATCACACCAATTGCTAGCAGATCAAACCCAAGACCAGCAACAGGGACTACAGTAAGGTACAGAGAATGCTTGAAGAATCATGCGGCGAGCATGGGGGGACACATCGTGGACGGATGCGGCGAGTTCATGCCAAGCGGAGAAGGCACTCCGCAATCCTTGATATGTGCTGCTTGTGACTGCCACCGGAATTTTCACCGGAAAGAGACCGAAGGTGAACTTCAAACTAATGTCCTCAATTACTACGCCTGCCCTCCCTGCAAAAGCAATAACGCGCAAAGTAGGATTCTTTCTCCCCAGTTTGCGCCACTCCCTCCTTCTCTACATCATCATCAACATATGAGATTTGCAGGAGGGCCGTTCCCGCCATTTATGATGGCCTTCGGCGGCGGCAGCGGGGCGGCGGAGTCTTCGAGTGAAGATCTGAACATGTTTCAGTATAATGATGCGGGCGGGCAAGGGTCAGTACAGCCGGTACCGTCATCGAAGAAGAGGTTTAGGACCAAGTTCAGCCAGCAGCAGAAGGATAGGATGATGGAGTTTGCGGAGAAGTTGGGATGGAGGATCCAGAAACATGACGAGCAAGAAGTGCAGCAGTTTTGCAATCAAGTGGGTGTGAAGCGGCAGGTCTTCAAGGTTTGGATACACAATAACAAGCAGGCCATGAAGAAGCACCAAATATTTGACGGAAGCTGA 939 0.5016 MELSGLDKEIEMPLPTTSGCNPSNRDSSSSPTLASTVGETSSDQPLQTSDHYHPHHPPSLPSNPLQQFQRNTRDPDPPSVTAITPIASRSNPRPATGTTVRYRECLKNHAASMGGHIVDGCGEFMPSGEGTPQSLICAACDCHRNFHRKETEGELQTNVLNYYACPPCKSNNAQSRILSPQFAPLPPSLHHHQHMRFAGGPFPPFMMAFGGGSGAAESSSEDLNMFQYNDAGGQGSVQPVPSSKKRFRTKFSQQQKDRMMEFAEKLGWRIQKHDEQEVQQFCNQVGVKRQVFKVWIHNNKQAMKKHQIFDGS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0286 312 Gene3D - 231 305 - -
Prci10g0286 312 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 76 301 - -
Prci10g0286 312 SUPERFAMILY Homeodomain-like 234 306 IPR009057 -
Prci10g0286 312 ProSiteProfiles 'Homeobox' domain profile. 242 306 IPR001356 GO:0003677
Prci10g0286 312 MobiDBLite consensus disorder prediction 1 98 - -
Prci10g0286 312 FunFam Zinc-finger homeodomain protein 2 232 305 - -
Prci10g0286 312 MobiDBLite consensus disorder prediction 16 48 - -
Prci10g0286 312 MobiDBLite consensus disorder prediction 62 97 - -
Prci10g0286 312 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 101 150 IPR006456 -
Prci10g0286 312 NCBIfam homeobox domain, ZF-HD class 244 301 IPR006455 -
Prci10g0286 312 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 102 150 IPR006456 -
Prci10g0286 312 Pfam ZF-HD protein dimerisation region 100 151 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0286 Prci-Chr10 1806265 1809396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0286 87 308 ZF-HD Transcription Factor Family AT2G18350 50.000 2.93e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci10g0286 ZF-HD_dimer 8.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0286 - - qsu:111998832 310.457