Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0284 ATGGAACTGAGTGGCTTAGATAAGGAAATAGAGATGCCATTACCAACCACTTCAGGTTGTAATCCCTCCAACAGGGACTCATCTTCTTCTCCAACTCTAGCTTCAACAGTAGGGGAGACGAGTAGTGATCAACCCCTTCAAACTTCAGACCACTATCATCCTCATCATCCTCCTTCTCTGCCATCGAACCCACTCCAGCAATTTCAGAGAAACACAAGAGATCCAGATCCGCCGAGCGTAACAGCGATCACACCAATTGCTAGCAGATCAAACCCAAGACCAGCAACAGGGACTACAGTAAGGTACAGAGAATGCTTGAAGAATCATGCGGCGAGCATGGGGGGACACATCGTGGACGGATGCGGCGAGTTCATGCCAAGCGGAGAAGGCACTCCGCAATCCTTGATATGTGCTGCTTGTGACTGCCACCGGAATTTTCACCGGAAAGAGACCGAAGGTGAACTTCAAACTAATGTCCTCAATTACTACGCCTGCCCTCCCTGCAAAAGCAATAACGCGCAAAGAGGGCCGTTCCCGCCATTTATGATGGCCTTCGGCGGCGGCAGCGGGGCGGCGGAGTCTTCGAGTGAAGATCTGAACATGTTTCAGTATAATGATGCGGGCGGGCAAGGGTCAGTACAGCCGGTACCGTCATCGAAGAAGAGGTTTAGGACCAAGTTCAGCCAGCAGCAGAAGGATAGGATGATGGAGTTTGCGGAGAAGTTGGGATGGAGGATCCAGAAACATGACGAGCAAGAAGTGCAGCAGTTTTGCAATCAAGTGGGTGTGAAGCGGCAGGTCTTCAAGGTTTGGATACACAATAACAAGCAGGCCATGAAGAAGCACCAAATATTTGACGGAAGCTGA 867 0.5052 MELSGLDKEIEMPLPTTSGCNPSNRDSSSSPTLASTVGETSSDQPLQTSDHYHPHHPPSLPSNPLQQFQRNTRDPDPPSVTAITPIASRSNPRPATGTTVRYRECLKNHAASMGGHIVDGCGEFMPSGEGTPQSLICAACDCHRNFHRKETEGELQTNVLNYYACPPCKSNNAQRGPFPPFMMAFGGGSGAAESSSEDLNMFQYNDAGGQGSVQPVPSSKKRFRTKFSQQQKDRMMEFAEKLGWRIQKHDEQEVQQFCNQVGVKRQVFKVWIHNNKQAMKKHQIFDGS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0284 288 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 75 277 - -
Prci10g0284 288 SUPERFAMILY Homeodomain-like 210 282 IPR009057 -
Prci10g0284 288 ProSiteProfiles 'Homeobox' domain profile. 218 282 IPR001356 GO:0003677
Prci10g0284 288 FunFam Zinc-finger homeodomain protein 2 208 281 - -
Prci10g0284 288 Pfam ZF-HD protein dimerisation region 100 151 IPR006456 -
Prci10g0284 288 Gene3D - 207 281 - -
Prci10g0284 288 MobiDBLite consensus disorder prediction 1 98 - -
Prci10g0284 288 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 101 150 IPR006456 -
Prci10g0284 288 NCBIfam homeobox domain, ZF-HD class 220 277 IPR006455 -
Prci10g0284 288 MobiDBLite consensus disorder prediction 16 48 - -
Prci10g0284 288 MobiDBLite consensus disorder prediction 62 97 - -
Prci10g0284 288 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 102 150 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0284 Prci-Chr10 1806265 1809875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0284 87 284 ZF-HD Transcription Factor Family AT2G18350 55.665 5.56e-70 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Prci10g0284 ZF-HD_dimer 7.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0284 - - gmx:100776691 266.159