Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci10g0273 | ATGAACGATCTGATGACGAAATCATTTCTAAGTTATGTTGAACTGAAGAAACTAGCACGAAAGGACCTTGAAGCCGATCTTGACATCGAAGCAGGGCAATTTAATCCCATTGAAGACCAAAACCTCTCTCAGTTCTTCGAAGAAGTTGATGCCATCAAGTCCGAAATGGAAGAGATCACCAATCTCTTATTCGATCTTCAACACCTGAATGAAGATACAAAATCAACCCACAGCACCAAAGTTCTTCGTGGGCTCAGAGACCGAATGGAATCAGACATGGTCACCATTCTTCGCAAAGCGAATATCGTCAAGTCAAGGCTAGAATCGCTTGACCAATCCAACATAAAAAATCGCAAAATATCAGAATCCTATAAAGAAGGAACCCTGGTCGATAGAACAAGAATATCAATTACAAATGGCCTAAGAGTGAAGCTGAGAGACTTAATGAATGAATTTCAATCCCTGAGAAACAAGATTCTATCTGATCACAAGGAGGATTTGAAGAGAAGATACTACACTGCAACAGGAGAGATACCGAGTGATGAAATGGTGCAGAAGATGGTTTCTGGGAGTGTCAAAGTGGAGTTTTTTAAAACAGAGGCTGATATGACGGCTGAGACTCAGGTTAGGCACCAGGCTGTGATGGATATACAGAGAAGTTTGGATAAACTTCATCAGGTTTTTCTTGACATGGCTATTATCGTGGAGACACAAGGCGAGAAAGTGGACAACATTGAAGATAATGTAGCCAATGCTAGGAGCTTCGTTCATGGTGGAACTAATAATCTTTACTATGCTAACCAGATGAAGAAGAACCAAAAATGGGCATGGTGGGTTTGTGCCGTGGGACTGATTATACTTTTGGTGTGCTTAATTGCACTACTAGCTTCTTGA | 894 | 0.4105 | MNDLMTKSFLSYVELKKLARKDLEADLDIEAGQFNPIEDQNLSQFFEEVDAIKSEMEEITNLLFDLQHLNEDTKSTHSTKVLRGLRDRMESDMVTILRKANIVKSRLESLDQSNIKNRKISESYKEGTLVDRTRISITNGLRVKLRDLMNEFQSLRNKILSDHKEDLKRRYYTATGEIPSDEMVQKMVSGSVKVEFFKTEADMTAETQVRHQAVMDIQRSLDKLHQVFLDMAIIVETQGEKVDNIEDNVANARSFVHGGTNNLYYANQMKKNQKWAWWVCAVGLIILLVCLIALLAS | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci10g0273 | 297 | SMART | tSNARE_6 | 199 | 266 | IPR000727 | - | |
Prci10g0273 | 297 | Pfam | SNARE domain | 240 | 289 | IPR000727 | - | |
Prci10g0273 | 297 | CDD | SynN | 42 | 191 | IPR006011 | GO:0016020 | |
Prci10g0273 | 297 | CDD | SNARE_syntaxin1-like | 205 | 263 | - | - | |
Prci10g0273 | 297 | SUPERFAMILY | t-snare proteins | 40 | 259 | IPR010989 | GO:0016020|GO:0016192 | |
Prci10g0273 | 297 | FunFam | Syntaxin 132 | 198 | 296 | - | - | |
Prci10g0273 | 297 | Gene3D | - | 198 | 296 | - | - | |
Prci10g0273 | 297 | PANTHER | SYNTAXIN | 44 | 286 | IPR045242 | - | |
Prci10g0273 | 297 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 204 | 266 | IPR000727 | - | |
Prci10g0273 | 297 | Pfam | Syntaxin | 44 | 239 | IPR006011 | GO:0016020 | |
Prci10g0273 | 297 | Gene3D | - | 38 | 168 | - | - | |
Prci10g0273 | 297 | Coils | Coil | 138 | 158 | - | - | |
Prci10g0273 | 297 | SMART | SynN_4 | 37 | 164 | IPR006011 | GO:0016020 | |
Prci10g0273 | 297 | FunFam | Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group | 39 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci10g0273 | Prci-Chr10 | 1748367 | 1750150 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci10g0273 | 1 | 297 | SNARE and Associated Proteins | AT2G18260 | 61.238 | 1.44e-134 | 382 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci10g0273 | K08486 | - | jre:108997509 | 429.483 |