Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0238 ATGGCCTTCTTCTCTTCCTCTTCCGCTGAAACCAACCTTGCCACCGCCAAGACGTTCTTTTCAACGGCCGCCTCCGTCGTGGCCACCGCAATGCTTGTCCGATCAGTGGCGCGGGACTTCTTGCCCGCTGAAATTCAGGACTATTTCTTCGGCGGTATCCGTGGAATCTTTCATCGATTCTCTTCTCAACTTACCATCGTCATCGACGAGTTCGATGGTCTCGTGAGCAACCGAATCTACGACGCGGCACACACTTACTTGGGCAAAAAAATCTCCCCCTCCACGCGTAGACTCAAAGTTAGCAAGCCTGATGTTGAGAAGGGCTTCGCGATCACCGTGGAACGCGACGAGGTCATCGAAGACGTGTTCGATGGCGTCAAATTCAAATGGGTCTTTATATGCAGGGAGGTTGAGTCTTTTCGCAATCCGAGAGACTTGAATTCGACGCTGCGGTCTGAAGTCCGATCTTTGGAATTGAGTTTCCACAAGAAGCACAAGGAGTTGGTGTTAACGTCGTACCTTCCCTTTATTATGCAAGAAGCGCAATTAATGAAGCAAGAAGCGAGGGCCCTGAGGATCTTTACGGTGGACTACGAGGGTATGTACGGGAATCTGAACGACGCGTGGATCCCAACGAACCTGGACCATCCGGCAACGTTTGAGACGGTGGCATTGGACCCGGAAATCAATAAATTCGTGCTGGAGGATCTGGAGAGGTTTGTGAGGAGGAAAGAATATTACAGGAAGGTAGGGAAGGCGTGGAAGAGAGGGTATTTGCTGTATGGGCCACCTGGAACTGGGAAATCGAGCTTGATCGCTGCAATGGCCAATTACTTGCATTTTGACATATACGACTTGGAGCTGACGGAACTAAGATGCAACTCGGAGCTCCGACGGTTACTGATTGCTATGGCAAATCGGTCCATTCTAGTTGTGGAAGACATTGACTGCACCATTGAGCTCCAGAATCGCATGGCAGAATCAACGGCCGCTTCAGGATCTGGATCCTCACAACCACAGGTGACACTGTCGGGGCTATTGAACTTCATTGACGGGCTGTGGTCAAGCTGTGGGGACGAGAGGATTATAGTGTTCACAACCAACCACAAAGAGAAGCTTGACCCTGCATTGCTGCGTCCCGGTCGTATGGACGTTCACATCCACATGTCCTACTGCACTCCCTCTGTGTTTAGGCAGCTTGCTTCTAATTACCTTGGACTTAAGCACCACTCTCTTTTCTCTCAAGTCGAAGAAGCCATTCTTGCCACCCACGTCACTCCTGCTGAAGTGGCTGAGCAACTCTTGAAGAGCAGCGATCATCACTCTCTTCTTCAAGACCTTCTGCACTTTCTTGCGCAGAAAAAGATGGAGAATGAAGAGCTTGAGGCTAAAAAGAAGGAAGAAGAACTTCTGTCGAATGATAAAGAAAAGCAACCAGCTGATGATCACGACAAACTAGTGGATAAGGACAAAAGAGAAAGGGATGTAGCAGTTCAGCAAACCATTGAACTATGA 1515 0.4937 MAFFSSSSAETNLATAKTFFSTAASVVATAMLVRSVARDFLPAEIQDYFFGGIRGIFHRFSSQLTIVIDEFDGLVSNRIYDAAHTYLGKKISPSTRRLKVSKPDVEKGFAITVERDEVIEDVFDGVKFKWVFICREVESFRNPRDLNSTLRSEVRSLELSFHKKHKELVLTSYLPFIMQEAQLMKQEARALRIFTVDYEGMYGNLNDAWIPTNLDHPATFETVALDPEINKFVLEDLERFVRRKEYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLHFDIYDLELTELRCNSELRRLLIAMANRSILVVEDIDCTIELQNRMAESTAASGSGSSQPQVTLSGLLNFIDGLWSSCGDERIIVFTTNHKEKLDPALLRPGRMDVHIHMSYCTPSVFRQLASNYLGLKHHSLFSQVEEAILATHVTPAEVAEQLLKSSDHHSLLQDLLHFLAQKKMENEELEAKKKEEELLSNDKEKQPADDHDKLVDKDKRERDVAVQQTIEL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0238 504 CDD RecA-like_BCS1 233 389 - -
Prci10g0238 504 Pfam ATPase family associated with various cellular activities (AAA) 259 390 IPR003959 GO:0005524|GO:0016887
Prci10g0238 504 Coils Coil 444 478 - -
Prci10g0238 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 436 IPR027417 -
Prci10g0238 504 Pfam Domain associated at C-terminal with AAA 41 133 IPR025753 -
Prci10g0238 504 ProSitePatterns AAA-protein family signature. 361 379 IPR003960 GO:0005524|GO:0016887
Prci10g0238 504 MobiDBLite consensus disorder prediction 462 494 - -
Prci10g0238 504 Gene3D - 210 387 IPR027417 -
Prci10g0238 504 Gene3D - 388 458 - -
Prci10g0238 504 PANTHER BCS1 AAA-TYPE ATPASE 21 459 - -
Prci10g0238 504 SMART AAA_5 254 393 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0238 Prci-Chr10 1619403 1623048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0238 256 424 Calmodulin-binding Proteins AT3G56690 27.528 1.21e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0238 - K08900 qsu:112035142 648.277