Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0230 ATGGTTCGCCAAATAATTTCTCGGTCACTCGTTTTCATTGGCTCATATGTATCTCTCTGTATGTGCGGGCTTTTCTGTTTTCTTTTCTTTTCTTTTCTTTTCTTTTGCAGCAATGGTTATGGCAGTTCGTTTGCCGAAAGCAGGCAAAGCACTGAAATATATTTAAGAGAAAAAGGGCAAGAAGATTATTTCGATCGTCCTCAACGTTCATCCGGCGACGGCGTGCTTAATGTTGTAAGAATAAAAGACGAGGTGTCTAAGAATTATTTACCCAGACTCTGTGAAATGATGATAAGCAGCCTATCTAGTGCTTGTGCGAACAACGATTCACCAGTCTCATCACCAATCAGTAAACATTCTCATGTGACTGCAAAAGAGATTTGGCCTGCAGGGAATTATGATCTGCTGTGTCACCTTCAGAAGAGACCGATTGATGGAGGGGCAGCCCTATCCAATAAGACAACGTCGTACAACACCTTCGGTGCAGCGTCTTCGTCGTCAAGCTCCAATTTATCAGCCCCCGAGATGTCTCCTTCTTCACTGCTGTCATGCTCTCTCGATTCAAGTTCACAAATGTTGCTGGGCGGCAGTTCTCGTGGCCTTGGTCTTTCCTGCGATGCTTTAGGTCTCGACGACGACGTGCAACGGCGAGAAAATAGTCCATCGAACAGCTCAAACAAATTTTCAGCATCAGTGAGCGGGGTTGCAGGGGCGAAAACGTCTCGCAGTTGCTCTCAGCTGAAGGAATACGAAGCAAAAGCCAAGTCGAGACCTTCGTGCCCTCCCCTAAAGGTGAGAAAGGAAAGGCTAGGAGACAGGATTCAAGCACTTCAGAAGTTAGTGGCACCTTCTGGGAAGACCAATACTGCCTCCGTATTGGATGAAACTGTAGGCTACATCCACTTCCTTCATGGCCAGATACAGACTCTGAGCATATCTTATATGAAGTCATCGAAGACCAAGCGCCTCCGAACGTTACAGGATTTTAGAGAGGAAAAGAGCAGAGAATCGAAGCCAGACCTCAGAAGCAGAGGCCTCTGCCTTGTTCCCCTTTCCTACGCTTCATATATCCATAACTTGGACTAG 1086 0.4641 MVRQIISRSLVFIGSYVSLCMCGLFCFLFFSFLFFCSNGYGSSFAESRQSTEIYLREKGQEDYFDRPQRSSGDGVLNVVRIKDEVSKNYLPRLCEMMISSLSSACANNDSPVSSPISKHSHVTAKEIWPAGNYDLLCHLQKRPIDGGAALSNKTTSYNTFGAASSSSSSNLSAPEMSPSSLLSCSLDSSSQMLLGGSSRGLGLSCDALGLDDDVQRRENSPSNSSNKFSASVSGVAGAKTSRSCSQLKEYEAKAKSRPSCPPLKVRKERLGDRIQALQKLVAPSGKTNTASVLDETVGYIHFLHGQIQTLSISYMKSSKTKRLRTLQDFREEKSRESKPDLRSRGLCLVPLSYASYIHNLD 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0230 361 Gene3D - 264 329 IPR036638 GO:0046983
Prci10g0230 361 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 125 354 - -
Prci10g0230 361 SMART finulus 265 309 IPR011598 GO:0046983
Prci10g0230 361 CDD bHLH_AtbHLH_like 264 311 IPR045239 -
Prci10g0230 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 316 IPR036638 GO:0046983
Prci10g0230 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 303 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0230 Prci-Chr10 1602463 1605657 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0230 251 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 56.481 1.19e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0230 - - pcin:129322669 627.861