Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0229 ATGGACTATAGGGATTTCCGCCTTCAGCATCAGCTTCAAGAACACGCTCGCTACAATAAACCTTCCATTGCTTGCGAAGCATGGAACTCGAGCAACTCATGCAATGGTTATGGCAGTTCGTTTGCCGAAAGCAGGCAAAGCACTGAAATATATTTAAGAGAAAAAGGGCAAGAAGATTATTTCGATCGTCCTCAACGTTCATCCGGCGACGGCGTGCTTAATGTTGTAAGAATAAAAGACGAGGTGTCTAAGAATTATTTACCCAGACTCTGTGAAATGATGATAAGCAGCCTATCTAGTGCTTGTGCGAACAACGATTCACCAGTCTCATCACCAATCAGTAAACATTCTCATGTGACTGCAAAAGAGATTTGGCCTGCAGGGAATTATGATCTGCTGTGTCACCTTCAGAAGAGACCGATTGATGGAGGGGCAGCCCTATCCAATAAGACAACGTCGTACAACACCTTCGGTGCAGCGTCTTCGTCGTCAAGCTCCAATTTATCAGCCCCCGAGATGTCTCCTTCTTCACTGCTGTCATGCTCTCTCGATTCAAGTTCACAAATGTTGCTGGGCGGCAGTTCTCGTGGCCTTGGTCTTTCCTGCGATGCTTTAGGTCTCGACGACGACGTGCAACGGCGAGAAAATAGTCCATCGAACAGCTCAAACAAATTTTCAGCATCAGTGAGCGGGGTTGCAGGGGCGAAAACGTCTCGCAGTTGCTCTCAGCTGAAGGAATACGAAGCAAAAGCCAAGTCGAGACCTTCGTGCCCTCCCCTAAAGGTGAGAAAGGAAAGGCTAGGAGACAGGATTCAAGCACTTCAGAAGTTAGTGGCACCTTCTGGGAAGACCAATACTGCCTCCGTATTGGATGAAACTGTAGGCTACATCCACTTCCTTCATGGCCAGATACAGACTCTGAGCATATCTTATATGAAGTCATCGAAGACCAAGCGCCTCCGAACGTTACAGGATTTTAGAGAGGAAAAGAGCAGAGAATCGAAGCCAGACCTCAGAAGCAGAGGCCTCTGCCTTGTTCCCCTTTCCTACGCTTCATATATCCATAACTTGGACTAG 1077 0.4745 MDYRDFRLQHQLQEHARYNKPSIACEAWNSSNSCNGYGSSFAESRQSTEIYLREKGQEDYFDRPQRSSGDGVLNVVRIKDEVSKNYLPRLCEMMISSLSSACANNDSPVSSPISKHSHVTAKEIWPAGNYDLLCHLQKRPIDGGAALSNKTTSYNTFGAASSSSSSNLSAPEMSPSSLLSCSLDSSSQMLLGGSSRGLGLSCDALGLDDDVQRRENSPSNSSNKFSASVSGVAGAKTSRSCSQLKEYEAKAKSRPSCPPLKVRKERLGDRIQALQKLVAPSGKTNTASVLDETVGYIHFLHGQIQTLSISYMKSSKTKRLRTLQDFREEKSRESKPDLRSRGLCLVPLSYASYIHNLD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0229 358 Gene3D - 261 326 IPR036638 GO:0046983
Prci10g0229 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 251 300 IPR011598 GO:0046983
Prci10g0229 358 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 111 351 - -
Prci10g0229 358 SMART finulus 262 306 IPR011598 GO:0046983
Prci10g0229 358 CDD bHLH_AtbHLH_like 261 308 IPR045239 -
Prci10g0229 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 261 313 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0229 Prci-Chr10 1602105 1605657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0229 250 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 57.547 6.36e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0229 - - pcin:129322669 583.948