Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0227 ATGTCAAACACGAAGCTGGAGCAATGGCAATGGGAAAACGCCACGGCCGGCGCCGTTGCAGGGTTTGCCACCGTCGCTGTCATGCATCCCCTGGACGTTGTCCGAACTAGGTTCCAAGTTAATGACGGTCGAGTTCCCCTTGTTCCGAGTTATAAGAATACTGCTCACGCCATTTTCACCATTGCTCGCTCAGAGGGCTTAAGAGGTCTGTATGCAGGCTTGCTTCCTGCAGTCCTTGGGTCAACTATTTCGTGGAGTCTATACTTCTATTTCTATGACAAAGCCAAACAAAGGTATGCAAGGAACAGGGAGGAGAAGTTGAGCCCTGGTTATCATCTCGCTTCAGCTGCTGAAGCAGGGACTTTGGTTTGCTTATGCACAAATCCTGTTTGGCTAGTAAAAACAAGAATGCAGCTTCAGACTCCTCTGCATCAAACACAACCGTATAATGGGATTTATGATGCGTTTAAAACCATTTTGAAAGAAGAAGGATTGAGGGCACTGTACAGAGGACTTGTTCCTAGTCTTTTTCTGGTCTCTCATGGTGCTATGCAGTTCATGGTATATGAAGAGTTTCGGAAAATGGTTATAGACTTGAAAAGCTCGGAAAGTGAAATGCGTCATCAAAACCCTGATATGCTGTTGAATTCTATGGATTACGCTGTTCTTGGAGCAACCTCAAAAGTTGCTGCCACTCTTATAAGCTATCCATTTCAGGTTCTACGGTCTCGATTGCAGCAACGGCCTAGTGTTGGTGGGATTCCAAGATATATGGATAGCTGGCATGTCGTGAAGGAAACTGCACGGTTTGAAGGTGTTCGAGGTTTTTACAAAGGGATCACCCCAAATCTATTGAAAAATGTTCCTGCTTCATCAGTAACATTTATTGTCTATGAAAATGTGCTTAAATTGCTTAAACTAACTAGAAGGAATGACTAG 939 0.443 MSNTKLEQWQWENATAGAVAGFATVAVMHPLDVVRTRFQVNDGRVPLVPSYKNTAHAIFTIARSEGLRGLYAGLLPAVLGSTISWSLYFYFYDKAKQRYARNREEKLSPGYHLASAAEAGTLVCLCTNPVWLVKTRMQLQTPLHQTQPYNGIYDAFKTILKEEGLRALYRGLVPSLFLVSHGAMQFMVYEEFRKMVIDLKSSESEMRHQNPDMLLNSMDYAVLGATSKVAATLISYPFQVLRSRLQQRPSVGGIPRYMDSWHVVKETARFEGVRGFYKGITPNLLKNVPASSVTFIVYENVLKLLKLTRRND 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0227 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
Prci10g0227 312 FunFam Folate transporter 1, chloroplastic 104 310 - -
Prci10g0227 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 304 IPR018108 -
Prci10g0227 312 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 308 IPR044712 GO:0006862|GO:0055085
Prci10g0227 312 Gene3D Mitochondrial carrier domain 51 311 IPR023395 -
Prci10g0227 312 SUPERFAMILY Mitochondrial carrier 11 300 IPR023395 -
Prci10g0227 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 195 IPR018108 -
Prci10g0227 312 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Prci10g0227 312 Pfam Mitochondrial carrier protein 107 197 IPR018108 -
Prci10g0227 312 Pfam Mitochondrial carrier protein 10 102 IPR018108 -
Prci10g0227 312 Pfam Mitochondrial carrier protein 219 306 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0227 Prci-Chr10 1573704 1581684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0227 30 306 Chloroplast and Mitochondria Gene Families AT1G25380 33.688 1.18e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0227 K15115 - gmx:100790192 503.442