Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0221 ATGGCGGGTTTATTCTCACTAGGCGGCGGAGGGGGTAGGGAAGGAGGGAGCAACCAGGAGGACCAGCCCCACCACGGCAACCCACCCACGGGAGTTCCTCACCCGGACGCCTTATTTTGGTACAAGAACAATGAAGACGTGCCTTGTTACAGAGGCTTCGAGCTCTGGAACCAGCAGCAGCATGTCATGCCGCCTCAGGCCAGGCCGCTTCTCCCCCAAGATCTTTACTCCCTAGGGGTGGGGCCCAGCAGCAGGAGCTCCGATGACCAGTCCTCGTCGAGATCGGGCGTCATGATGATGCGTTCAGCCGGGACGAGCGGTGGCGGAATAAGCTGCCAGGACTGCGGGAACCAGGCCAAGAAGGACTGCCCGCACATGCGGTGCAGGACTTGCTGCAAGAGCCGAGGCTACGACTGCGAGACCCATGTCAAGAGCACTTGGGTTCCCGCTGCTAAGCGTCGCGAGCGCCAGCAGCAGCAACTGCAGCACCAGCTTGAGCTTCGAGGGGACAACAATCCCAAGAGGCTGAGAGATACTTCTAATAATAACCCCAGCACTTCTGCTCATGTCCAAATGCCCACCCACTCCTCCTCAGCAGAGGGGTTAGAGCTTGGGAATTTTCCAGCAGTGTTCAGTTCTTCGGCGGAGTTCCGGTGCGTGCGGGTTAGCTCGATGGACGAGGCCGAGGAGCAATACGCGTACCAGACGGCCGTGAACATCGGAGGCCATGTATTCAGAGGAATTCTCTATGACCAAGGCCCCGATCCCAGTTACATCTCCACCGCTGATACTTCTCCCGGCGGAGCCGTTCAGCCCCTCAACCTCATCGCTGCCACCGGCGCTTCCGCTCTTCCCGCTGCCGCGACAAGCGGTGGTGCCGCCGGGGCTTCCTCCACTGGCCCACTCCTCGATCCTTCCATGTACGCGGCGCCACTAAACCCTTTCATGTCTGGCAGTGGTACGCAGTTCTTTCCTCATCCAAGATCTTGA 990 0.597 MAGLFSLGGGGGREGGSNQEDQPHHGNPPTGVPHPDALFWYKNNEDVPCYRGFELWNQQQHVMPPQARPLLPQDLYSLGVGPSSRSSDDQSSSRSGVMMMRSAGTSGGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCETHVKSTWVPAAKRRERQQQQLQHQLELRGDNNPKRLRDTSNNNPSTSAHVQMPTHSSSAEGLELGNFPAVFSSSAEFRCVRVSSMDEAEEQYAYQTAVNIGGHVFRGILYDQGPDPSYISTADTSPGGAVQPLNLIAATGASALPAAATSGGAAGASSTGPLLDPSMYAAPLNPFMSGSGTQFFPHPRS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0221 329 MobiDBLite consensus disorder prediction 1 37 - -
Prci10g0221 329 MobiDBLite consensus disorder prediction 176 201 - -
Prci10g0221 329 MobiDBLite consensus disorder prediction 150 201 - -
Prci10g0221 329 MobiDBLite consensus disorder prediction 79 111 - -
Prci10g0221 329 NCBIfam putative zinc finger domain, LRP1 type 111 153 IPR006510 -
Prci10g0221 329 Pfam Domain of unknown function (DUF702) 109 255 - -
Prci10g0221 329 NCBIfam LRP1 C-terminal domain 207 254 IPR006511 -
Prci10g0221 329 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 313 IPR007818 GO:0003700|GO:0006355
Prci10g0221 329 MobiDBLite consensus disorder prediction 73 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0221 Prci-Chr10 1539241 1541699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0221 1 318 C2H2 Transcription Factor Family AT5G66350 47.633 7.64e-82 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Prci10g0221 DUF702 3.2e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0221 - - qsa:O6P43_024815 337.035