Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0216 ATGGTGCTTGAACGAGCCAAGCTGCACATAATCTTGACGTTTTTACAGTTCTGTCATGCAGGAAACCATTTTTTTCTGCGACTTGCACTTAATATGGGCGTGAGCAAACTGGTCTTGCCTGTTTATCGAAACATCATTGCTCTGATTCTTCTGGGTCCCCTTGCTTATTTTTCAGAAAAGAACCAAAGGCCATTGATAACCATTTCTTGTGTGATACGGTTTTCCTTACTTGGACTTGTCGGAATAACAATGAAAGAAGGATTCTACCTCGTGGGTTTGGAAAATACATCCCCTACATTTGCGTCCGCTATGCAGAATTCTGTTCCGGCTCTAACCTTTCTCATGGCTGTAATACTCAGATTTGAGAGCGTACGCCTAAACAGGGTATCTGGGGTGGCTAAGGTCCTTGGAGTCATTGCTTCTGTAGCAGGAGCTTCAGTGATTACGCTGTTCAAGGGACCTATCATTTACAATCCACGTTCAGCTTTACATCAGAAATACCTGTTGCCGTTATTAGTGGGTGGCCACGGGAAAAGCTGGACCTTGGGTTGCATTGGTCTCATTGGTCACTGCCTAAGTTGGTCTGGTTGGATTGTTATGCAAGCATCTGTGCTGAAAAAATTCCCAGCCCCACTCTCCGTTTCAGCGTCTACTTGCTTCTTCGGTATTATGCAGTTTTTGATGCTAGCAGCCTCTTTTGAGCATGATTCTGAATCCTGGCATCTTAACTCTAGCGACGAGCTCTACAGCCTTTTGTATGCGGGAGTGGTGGTTTCCGCGCTAGCAGCAGCATTACAGATATGGGCTATTGGCAAGGGAGGGCCCGTGTTTACTTCTGTTTATCAGCCTGTGCAAACAATAATTGTAGGTTTAATCACATCTTTTGCTTTAGGTGAAGAATTCTTCTTGGGAGGAATTCTTGGAGCTTCTTTGATCATATTTGGATTATACCTTGTTGTCTGGGGAAAAAGTGAAGAAGCCAAGCCTGGCAAAGAGGTCACTGTCCCCCTTGCTTCGGAGAAGCATGTGGAAGAAAATTTTGAAAATTCTTCCCTCGTGCAACCGTTGATTCCACCACAAATTCCTCAGAGGGCAACGAGTTCCATAGATTTATTTTAA 1119 0.4441 MVLERAKLHIILTFLQFCHAGNHFFLRLALNMGVSKLVLPVYRNIIALILLGPLAYFSEKNQRPLITISCVIRFSLLGLVGITMKEGFYLVGLENTSPTFASAMQNSVPALTFLMAVILRFESVRLNRVSGVAKVLGVIASVAGASVITLFKGPIIYNPRSALHQKYLLPLLVGGHGKSWTLGCIGLIGHCLSWSGWIVMQASVLKKFPAPLSVSASTCFFGIMQFLMLAASFEHDSESWHLNSSDELYSLLYAGVVVSALAAALQIWAIGKGGPVFTSVYQPVQTIIVGLITSFALGEEFFLGGILGASLIIFGLYLVVWGKSEEAKPGKEVTVPLASEKHVEENFENSSLVQPLIPPQIPQRATSSIDLF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0216 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 324 - -
Prci10g0216 372 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Prci10g0216 372 Pfam EamA-like transporter family 17 137 IPR000620 GO:0016020
Prci10g0216 372 PANTHER WAT1-RELATED PROTEIN 11 332 IPR030184 GO:0016020|GO:0022857
Prci10g0216 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0216 Prci-Chr10 1473285 1476308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0216 2 357 Nodulin-like Gene Family AT1G75500 57.995 9.37e-144 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0216 - - gmx:100790386 466.848