Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0199 ATGGATGTTCATCTTCAACCTCTCGGCATGGTCGTGTTGTGCGGAATCCCACTGTTACTCTTGCTGGGACTGCTCTCTCGAATCCGTAAAAGACCACCCTACCCTCCGGGGCCAAAAGGCCTTCCCATCCTGGGCAACATGATGATGATGGACCAGCTAACGCACAGAGGGTTAGCCAAGCTAGCCAACCACTATGGCGGCATACTCCACCTCCGTATGGGCTTCCTCCACATGGTAGCCATCTCCGACGCCGACGCCGCACGCCAGGTGCTTCAGGTGCATGATCACATCTTCTCCAACCGCCCCGCCACCATAGCCATCAGCTACCTCACCTACGACCGGGCCGACATGGCTTTTGCTCACTACGGTCCCTTCTGGAGGCAGATGCGCAAGATCTGCGTCGTGAAGCTCTTCGGCCGGAAGCGCGCAGAGTCGTGGCAATCGGTTCGAGAGGAAGTGGAGACGGTGATCCGTACGGTGGGGGCGAACACGGGGAAGGAAGTGAATATCGGGGAGCTGGTGTTTTCGCTGACAAAAAATATAACATACCGGGCGGCTTTCGGGTCGAGCTCGCAGGAGGGACAGGACGAGTTCATCGGGATTCTTCAGGAGTTCTCCAAGTTGTTTGGAGCTTTCAATATAGCGGACTTTATACCCGGTCTCGGGTGGGTTGACCCGCAAGGGCTCAACGCCAGACTGGCCAAGGCTCGTGGCTCGCTGGACAGCTTCATAGACAAGATCATCGAGGAACACATAGAAAAGAGGAAGCAGCCGGATGAAGAAGGTGACATGGTGGATGAGTTGCTCGCCTTTTACAGTGAGGGCGAGTCTAGAGTCCGCGAATCCGACGATCTACAGAACTCCATCAAACTCACCAAGGATAACATCAAAGCCATCATAATGGACGTGATGTTCGGAGGGACGGAGACGGTGGCGTCGGCGATCGAGTGGGCCATGGCGGAGATAATGAGAAGCCCGGAAGATCTGAAGAGGGTCCAACAAGAACTGGCGGAGGTGGTGGGTCTCGATCGGAGAGTAGAAGAGTCGGACCTGGAGAAGCTGACGTACCTGAAATGCGCTCTCAAAGAGACGCTTCGCCTCCACCCGCCGATCCCCTTGCTCCTCCACGAGACGGCGGAAGACGCAGTGGTTTCGGGTTATTTCATTCCGAAGAAGTCACGCGTGATGATCAATGCCTGGGCCATCGGGAGGGACCGCAACGCCTGGCACGATCCCGACACATTCAAGCCGGCCCGCTTCCTCGGGGAAGGGGTCCCCGATTTCAAAGGGAGCAACTTCGAGTTCATTCCTTTCGGGTCCGGTCGCAGGTCATGCCCGGGGATGCAACTCGGGCTCTATGCCCTGGAACTGTCCGTAGCTCACCTTCTTCACTGTTTCTCGTTGGAATTGCCGGACGGCATGAAGCCGAGCGAGATGGACATGAGTGACATCTTCGGACTCACCGCTCCCAGGGCGAGTCGACTCGTTGCGGTGCCCAGAAACCGCTTGGTGTGCCCTCTTTTCTAA 1527 0.5684 MDVHLQPLGMVVLCGIPLLLLLGLLSRIRKRPPYPPGPKGLPILGNMMMMDQLTHRGLAKLANHYGGILHLRMGFLHMVAISDADAARQVLQVHDHIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKICVVKLFGRKRAESWQSVREEVETVIRTVGANTGKEVNIGELVFSLTKNITYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPGLGWVDPQGLNARLAKARGSLDSFIDKIIEEHIEKRKQPDEEGDMVDELLAFYSEGESRVRESDDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAEIMRSPEDLKRVQQELAEVVGLDRRVEESDLEKLTYLKCALKETLRLHPPIPLLLHETAEDAVVSGYFIPKKSRVMINAWAIGRDRNAWHDPDTFKPARFLGEGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELSVAHLLHCFSLELPDGMKPSEMDMSDIFGLTAPRASRLVAVPRNRLVCPLF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0199 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Prci10g0199 508 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 CDD CYP71-like 65 495 - -
Prci10g0199 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 FunFam Cytochrome P450 84A1 27 501 - -
Prci10g0199 508 SUPERFAMILY Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Prci10g0199 508 PANTHER CYTOCHROME P450 84A1-RELATED 13 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0199 Prci-Chr10 1313890 1316385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0199 42 507 Monolignol Biosynthesis Gene Families AT4G36220 74.630 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0199 K09755 - gmx:100783430 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci5g0034 5 942087 944896 Prci10g0199 10 1313890 1316385 CCT