Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0190 ATGCCTCCTCTTCTCTTTCTTATGGTGCTCTGCGCACCGTTACTAGCGTGCGCGGAGCGAAGCAGCGTCGCCATTGCCGAGATCGGAGCCCTCACCTCCTTCAAGCTCAACCTCCAGGATCCTCTCGGCGCTCTAGACGGCTGGGATCCTTCCTCGCCGGCCGCTCCTTGCGACTGGCGCGGAGTTGCTTGCTACAACAACAGAGTCACCGAGTTGCGCTTGCCTCGCCTTCAGCTCAGTGGCCGCCTCACTGCCCGTCTTTCTGACTTGCGCATGTTGCGGAAGCTGAGCCTTCGCTCCAACTCCTTCAACGGGACCATTCCTTCGTCTCTTGGTAAATGTGCGTTCCTTCGCGCCGTGTTTTTGCAGTACAACTCCTTCTCGGGGACTCTTCCGCCGGAGATCCGAAACCTCACCGGTCTTCAGATTCTTAATGTCGCGCAGAACCATCTCTCCGGTAGAATCCCCGGTGACCTCCCGTTGAGTCTGAAGTACGTCGACCTCTCGTCGAACTCCTTTTCCGGCGAGATTCCGAGTGCCATTGCCAACCTTTCTCAGCTCCAGCTGATCAACCTGTCGTACAACCAGTTCTCGGGCGAGATTCCGGCGAGCTTGGGAGAGCTTCAGCAGCTCGAATACCTCTGGCTTGATCACAATCTTCTCGGGGGAACTCTGCCTTCGGCACTCGCTAATTGCTCCTCGCTTGTGCATCTGAGCGCAGAAGGAAATGTGCTTGGAGGAGTGATTCCGGCGGCCATTGCAGCTCTTCCGTGGCTTCAGGTGATATCACTCTCTCAGAATAATCTCACCGGATCGATCCCAGCTTCCGTTTTCTGCAACATTTCGGTCTACACGTCGTCGCTTCGAATCGTTCAACTAGGATTTAATGGTTTTACGGATATTGTCGAGCCTCAGGCATCAACGTGTTTCAGTGTTCTTCAGGTTCTGGATATTCAGCACAACAGCATACACGGCAGGTTCCCCTTGTGGATAACGAAAACGTCCACGTTAACAATGCTTGATGTTTCGAGTAATGCATTTTCTGGCGAGATTCCACCAGGGATCGGAAACCTCGCTAAATTGGAGGAGTTAAGGATGGCCAACAATTCATTCACTGGGTTGATTCCAGAGGAAATCAAGAAATGTTCATTCCTGCGTGTTGTTGATTTTGAAGGCAACGGGTTTACCGGAGAAGTTCCTTCCTTTTTTGGTTACATGTCAAGGCTGAAGGTGCTGTCCCTTGGGGGGAATCTTTTCTCCGGTTCAGTTCCGGAGAGTTTTGGTAACCTTTCGGCGCTTGAATCCCTGAGTTTGAGAGGTAATAACTTGAATAGAACCATGCCTGAGGAAGTCATGGGATTGAGCAATATTTCAACTCTTGATCTTAGCGGAAATAAGTTCACGGGTCAAATATCTTCTAGTATTGGGAACCTGAGTCGATTAATGGTTCTCAATCTGAGTGGAAACGGCTTTTCCGGAAAAATCCCTGCTAGTTTGGGGAATCTTTTCAGGTTAACTACACTTGACTTGAGCAAGCAAAATCTTTCTGGGGAGTTACCATTTGAGCTTTCAGGGTTGCCGAATCTGCAAGTCATTGCTCTGCAGGAGAACAGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGATGAGCCTGCGATATGTGAACCTGAGCTCTAATGCATTTTCGGGACACATTCCTGAAAATTATGGCTTTCTTCGATCACTGATTGCTCTTTCTTTGTCTGACAACCACATTACGGGAATAATTCCTCCGGAGATCGGAAACTGTTCTGATGTTGAGGTTCTTGAGCTTGGTTCAAATTCTTTGACGGGTCATATTCCAACTGATCTCACTCGACTCACTCATTTGAGAGAGCTTGATTTGAGCAGGAATAATTTAACTGGAGATATACCCAGGGATATCTCCAAATGTTCGTCCTTAACTGCTCTGCTAGTGGACCACAACCGTCTTTCAGGCACTATACCGGAGTCGCTGTCTGAGCTATCAAACCTGACAATGCTTGATCTCTCTGCTAACAACTTGAGTGGGGAAATATCTAGTAATATTTCCATGATCCCTAATTTAGTGTCATTCAATGTATCGGGGAATGACCTGGAAGGTGAGATACCACCTACCTTGGGTGCTCGGTTCAACAATCCCTCTGCATTTTGGGATAATCAGAACTTATGTGGGAAGCCATTGGATAGGAAGTGTGAAAATGTAGTTGATAGGGATAGGAAGAGGTTGATTGTGTTGATTGTTGTAATTGTTGCTGGGGCTTGCTTATTATCATTGTGTTGCTGCTTCTACATGTACAGCCTTTTGCGGTGGCGTAAAAGGCTTAAGGAACGGGCGTCTGGGGAGAAGAAAAGGAGTCCTGCTAGGGCGAGTTCTGGAGCAAGCGGAGGTCGAGGCAGTACTGATAATGGTGGACCGAAGCTGGTCATGTTTAACACCAAAATTACACTCGCAGAAACCATTGAAGCAACTAGACAATTTGACGAAGAAAACGTGCTGAGCAGAACAAGGTATGGGTTGGTATTCAAGGCCTGCTACAACGATGGAATGGTGCTTTCAATTCGCAGACTCCAAGATGGATCACTGGACGAAAACATGTTCAGGAAAGAAGCAGAATCACTAGGTAAAGTGAAGCACCGAAATTTAACGGTTCTTCGAGGTTATTATGCCGGGCCACCTGACTTGAGGCTCCTGGTCTATGATTACATGCCTAATGGAAACCTTGCAACCCTCCTTCAAGAAGCGTCTCATCAGGACGGCCATGTTCTGAATTGGCCAATGCGCCACCTCATTGCACTCGGGATTGCTCGGGGGTTAGCCTTCCTACACCAGTCCTCAATGGTTCACGGGGACATGAAACCACAAAGTGTCCTGTTCGATGCTGATTTTGAAGCCCATTTGTCAGATTTTGGGCTCGACCGTCTCACAGTAGCCACCCCTGGCGAACCCTCCACTTCAACCTCAGTTGGCACATTGGGTTACGTATCACCTGAAGCTGTATTAACAGGGGAAGCCACGAAAGAGTCTGATGTGTACAGCTTTGGCATAGTGTTGCTCGAGCTTCTTACAGGAAAGCGACCAGTGATGTTCACACAGGACGAAGATATAGTGAAATGGGTGAAGAAACAACTACAAAGGGGTCAAATCACAGAATTATTGGAGCCAGGACTTCTTGAACTCGACCCAGAATCATCCGAGTGGGAAGAGTTCTTGCTGGGGGTGAAAGTGGGCTTGCTTTGCACAGCACCGGACCCTCTCGATCGACCAACCATGTCCGACATTGTGTTCATGCTCGAAGGTTGCCGCGTCGGACCCGACATCCCGTCCTCCGCTGATCCAACCTCTCAACCTTCGCCGGCATGA 3387 0.4892 MPPLLFLMVLCAPLLACAERSSVAIAEIGALTSFKLNLQDPLGALDGWDPSSPAAPCDWRGVACYNNRVTELRLPRLQLSGRLTARLSDLRMLRKLSLRSNSFNGTIPSSLGKCAFLRAVFLQYNSFSGTLPPEIRNLTGLQILNVAQNHLSGRIPGDLPLSLKYVDLSSNSFSGEIPSAIANLSQLQLINLSYNQFSGEIPASLGELQQLEYLWLDHNLLGGTLPSALANCSSLVHLSAEGNVLGGVIPAAIAALPWLQVISLSQNNLTGSIPASVFCNISVYTSSLRIVQLGFNGFTDIVEPQASTCFSVLQVLDIQHNSIHGRFPLWITKTSTLTMLDVSSNAFSGEIPPGIGNLAKLEELRMANNSFTGLIPEEIKKCSFLRVVDFEGNGFTGEVPSFFGYMSRLKVLSLGGNLFSGSVPESFGNLSALESLSLRGNNLNRTMPEEVMGLSNISTLDLSGNKFTGQISSSIGNLSRLMVLNLSGNGFSGKIPASLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLMSLRYVNLSSNAFSGHIPENYGFLRSLIALSLSDNHITGIIPPEIGNCSDVEVLELGSNSLTGHIPTDLTRLTHLRELDLSRNNLTGDIPRDISKCSSLTALLVDHNRLSGTIPESLSELSNLTMLDLSANNLSGEISSNISMIPNLVSFNVSGNDLEGEIPPTLGARFNNPSAFWDNQNLCGKPLDRKCENVVDRDRKRLIVLIVVIVAGACLLSLCCCFYMYSLLRWRKRLKERASGEKKRSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDLRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDMKPQSVLFDADFEAHLSDFGLDRLTVATPGEPSTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0190 1128 Gene3D Ribonuclease Inhibitor 26 160 IPR032675 -
Prci10g0190 1128 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Prci10g0190 1128 FunFam Probable LRR receptor-like serine/threonine-protein kinase At4g36180 161 250 - -
Prci10g0190 1128 Gene3D Transferase(Phosphotransferase) domain 1 911 1114 - -
Prci10g0190 1128 FunFam Uncharacterized protein 474 552 - -
Prci10g0190 1128 SUPERFAMILY L domain-like 476 733 - -
Prci10g0190 1128 Pfam Leucine rich repeat 648 707 IPR001611 GO:0005515
Prci10g0190 1128 Pfam Leucine rich repeat 576 635 IPR001611 GO:0005515
Prci10g0190 1128 Pfam Leucine rich repeat 407 467 IPR001611 GO:0005515
Prci10g0190 1128 Pfam Leucine rich repeat 162 221 IPR001611 GO:0005515
Prci10g0190 1128 Gene3D Ribonuclease Inhibitor 453 743 IPR032675 -
Prci10g0190 1128 SUPERFAMILY L domain-like 30 330 - -
Prci10g0190 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 620 740 - -
Prci10g0190 1128 SUPERFAMILY Protein kinase-like (PK-like) 815 1116 IPR011009 -
Prci10g0190 1128 ProSiteProfiles Protein kinase domain profile. 835 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0190 1128 FunFam LRR receptor-like serine/threonine-protein kinase 553 619 - -
Prci10g0190 1128 MobiDBLite consensus disorder prediction 788 815 - -
Prci10g0190 1128 PRINTS Leucine-rich repeat signature 670 683 - -
Prci10g0190 1128 PRINTS Leucine-rich repeat signature 625 638 - -
Prci10g0190 1128 SUPERFAMILY L domain-like 285 575 - -
Prci10g0190 1128 Pfam Protein kinase domain 845 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0190 1128 SMART LRR_typ_2 358 381 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 430 454 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 622 646 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 478 502 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 256 280 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 670 701 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 574 598 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 90 114 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 138 162 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 208 232 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 406 429 IPR003591 -
Prci10g0190 1128 SMART LRR_typ_2 526 549 IPR003591 -
Prci10g0190 1128 PANTHER LEUCINE RICH REPEAT KINASE 2 550 1108 - -
Prci10g0190 1128 Gene3D Ribonuclease Inhibitor 161 249 IPR032675 -
Prci10g0190 1128 SMART LRR_sd22_2 670 693 - -
Prci10g0190 1128 SMART LRR_sd22_2 208 234 - -
Prci10g0190 1128 SMART LRR_sd22_2 256 283 - -
Prci10g0190 1128 SMART LRR_sd22_2 454 480 - -
Prci10g0190 1128 SMART LRR_sd22_2 406 432 - -
Prci10g0190 1128 SMART LRR_sd22_2 622 651 - -
Prci10g0190 1128 FunFam Putative LRR receptor-like serine/threonine-protein kinase 798 910 - -
Prci10g0190 1128 Gene3D Ribonuclease Inhibitor 250 348 IPR032675 -
Prci10g0190 1128 Gene3D Phosphorylase Kinase; domain 1 811 910 - -
Prci10g0190 1128 Pfam Leucine Rich Repeat 360 382 IPR001611 GO:0005515
Prci10g0190 1128 Pfam Leucine Rich Repeat 481 502 IPR001611 GO:0005515
Prci10g0190 1128 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 911 1114 - -
Prci10g0190 1128 Gene3D Ribonuclease Inhibitor 349 452 IPR032675 -
Prci10g0190 1128 FunFam Uncharacterized protein 256 473 - -
Prci10g0190 1128 FunFam Nuclear pore complex protein NUP107 24 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0190 Prci-Chr10 1232714 1237272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0190 4 1128 Receptor kinase-like Gene Family AT4G36180 70.624 0.0 1536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Prci10g0190 Pkinase 5.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0190 - - gmx:100795838 1818.9