Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0189 ATGATGGAACCGATGGAGTCATGTGTCCCACCGGGCTTTCGTTTCCACCCAACAGACGAAGAGCTTGTAGGCTATTATCTCAGGAAGAAAGTAGCTTCTCAGAAGATAGATCTTGACGTTATCAGAGAGATCGATCTATACCGCATTGAACCATGGGATCTGCAAGAAAGATGCAGGATCGGGTATGAGGAACAGAACGAATGGTATTTCTTCAGCCACAAAGACAAGAAATATCCGACGGGGACGAGGACGAACAGAGCAACCGTGGCTGGGTTCTGGAAGGCGACCGGAAGAGACAAGGCTGTGTACGACAAGACCAAGCTCATAGGAATGAGGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTAATGGACAGAAAACTGACTGGATCATGCATGAGTATAGGCTTGAATCTGATGAAAATGCAACCCCTCAGGAAGAAGGATGGGTTGTATGCAGAGCATTCAAGAAAAGAAACAATGGCCAAACGAAGACAATAGAAGGATGGGATTCAGGTTACTTTTATGAGGAGACAAGTGGAGGCGACTTCGTAACAAGGCAGCCTCAGAGTTTGTTAGCTCAAAGTTTTTTATGTAAGGAGGAGATAGAAGCAGATAATAACTTAAGCTTCATGCACTCAGACCAGTTCGTACAGCTTCCTCAGCTAGAAAGTCCATCTCTGCCATTAATAAAGAGGCCAAGCTCGTCACTAGTGTCTTTAATATCACGCGATAATAATAAAGAAGATGACCAAAACAGGCTGGTCAACAACAACAACAGCAGAGTGACTGATTGGAGGGCTCTTGACAAATTTGTGGCTTCTCAATTGAGTCAAGATCAAGAGAGGCATGAGAGTAGTGATAATCATGGAGTGCCAGGCTTTGAAACCCATGAGGCAATGCTGCTATTGCAGAGTAGGGATGAAAGCAACAAGTTCAGCCCATTTTTAAATGGAAACTCAGACTGTGACATTGGGATATGCGTGTTTGAGAAATGA 999 0.4454 MMEPMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENATPQEEGWVVCRAFKKRNNGQTKTIEGWDSGYFYEETSGGDFVTRQPQSLLAQSFLCKEEIEADNNLSFMHSDQFVQLPQLESPSLPLIKRPSSSLVSLISRDNNKEDDQNRLVNNNNSRVTDWRALDKFVASQLSQDQERHESSDNHGVPGFETHEAMLLLQSRDESNKFSPFLNGNSDCDIGICVFEK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0189 332 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Prci10g0189 332 FunFam NAC domain-containing protein 18 162 - -
Prci10g0189 332 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Prci10g0189 332 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 257 - -
Prci10g0189 332 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Prci10g0189 332 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0189 Prci-Chr10 1212905 1217407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0189 2 331 NAC Transcription Factor Family AT2G18060 61.022 7.36e-159 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci10g0189 NAM 2.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0189 - - aprc:113869508 544.273