Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0181 ATGAATCTTATGATTTACCTCCTGGCTTTGAAGTTTGCTCTCAGTCAAAATTGGCTAGTTGCAGCTGGTGAAGAAAGTAAGGAGAAAGTAGATCAAAAGCTAAGAGAAATGAAGGTGCTTGAAGCAGTATATCCTCGCCCTTCAGCTATTCCTCCAAGTCCATCTGTTTCTTTAGATGTACAGGAGGAAGACTATGATGATAACCTCACTCCTCTTATCCCTATCGTTCCCATTGAGGAAGAAGAGCTTATGGATGTTAACCCTGAATTGCCAGCAACAATTGACACACCCGCCACTTCACAGGCACAAAGTTTGCACCAGTACATATCTACGACAGATAGACCCATATGTTCACAGCCTAGTACCTCGTCCTCTCTAGCCTTAACTGGGACATCTGGTTTGGAAGCAGAACTTGCTGCAGCTTCTGCTGTTGCTGCTGCCATCATGAACAGTAATGAACAAGGCAGCTCAGTTGACATGGATCTACTTGTTAGAATACTTAATGATCCATTATTGATTGCGAAGTTGAAAAGTGTTCATGATGGAGCTGCAGTGACCACTGTGAATACATCGGCAAACATAGTGGGTTTATCTAGTTCTGGATTCAAATGCACTTCTCCATCAGTTCCATCACCTCCGCTTAGACCTGATAAGCCAACTTCTGGGGTTAATCCCTCAAGTACTGTGGGTTTATTTCCTGATTCTGGCTTGGTACCAGCTACTTCATCGGTTCCATTGATGCATGCACTAGATAAGCCAGCGACCCAGTCACTTCCTTTTTCTGGGGCTATACCAGGGAAACTAGCAACTCCTTCAGCTCCATTGCCTTCACATACAACTAATGCTGATATTCACAAGCCTGTGAACAAAACCACTGACGATTTGTCAAGTGGTTGTCTGCTTTCTGTTCAGCAAGCAGCGTCTGTGGCTTCCATTTCATCCAGGGAACCGAGCATGGTACCGTTACCTTCAACAGGTGTGAGCATGCATGCAGTAGTAAACCAGGTGCGACCCCTTGCAACTACATTGGCTTACCGACCTAGTACCGGCTCAGCATTTGCTGGGAAGGAAGCTCATCCTGTGAGGGATCTCAGCTATTATAAGAACCTTATTAGGCAACATGGGGCTGATGATAATAATACTAGGCAAGAGACTCATGACTCCCAAATAGCTATCCGTCAAAGTAATTTCAAGGATTTGAAATCGGTTCATAGCAATAAACCGGGAGAAGTGAATTTCAAAATCCAGAAACCTTGCATATACTTCAAAAGTTCAAGAGGTTGTCGAAATGGTTCCAATTGCCCTTATCAACATGACATGTCAGCTCAATGGGGTCCTGTTCACATCCTAGGGTCCCAGAATGCAAAAAGAGCTAAATTAGGACCAGAAATCAGGGGTAGAACATTAATTTAG 1413 0.4402 MNLMIYLLALKFALSQNWLVAAGEESKEKVDQKLREMKVLEAVYPRPSAIPPSPSVSLDVQEEDYDDNLTPLIPIVPIEEEELMDVNPELPATIDTPATSQAQSLHQYISTTDRPICSQPSTSSSLALTGTSGLEAELAAASAVAAAIMNSNEQGSSVDMDLLVRILNDPLLIAKLKSVHDGAAVTTVNTSANIVGLSSSGFKCTSPSVPSPPLRPDKPTSGVNPSSTVGLFPDSGLVPATSSVPLMHALDKPATQSLPFSGAIPGKLATPSAPLPSHTTNADIHKPVNKTTDDLSSGCLLSVQQAASVASISSREPSMVPLPSTGVSMHAVVNQVRPLATTLAYRPSTGSAFAGKEAHPVRDLSYYKNLIRQHGADDNNTRQETHDSQIAIRQSNFKDLKSVHSNKPGEVNFKIQKPCIYFKSSRGCRNGSNCPYQHDMSAQWGPVHILGSQNAKRAKLGPEIRGRTLI 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0181 470 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 11 461 - -
Prci10g0181 470 MobiDBLite consensus disorder prediction 203 225 - -
Prci10g0181 470 ProSiteProfiles Zinc finger C3H1-type profile. 413 441 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0181 Prci-Chr10 1160476 1165982 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci10g0181 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0181 - - gmx:102661587 365.54