Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0177 ATGCCTTTGTTTCTTACACTTTCCTCTCTTCCTCATCCACCCAATCATAAATACCTCTCTTCTCTACCCCCTCCTCAATCGCGCTCGCTCTCTCTCTCTCTCTATATATATATATATCTCCCTCCCCGCCAAGAACATTCAAAGCTCAAGAAATTGCCATTCATGGCCATCAAAAAAGCCAACAAGCTACCGCAGCCAGTTGTGCTGAAGCAAATCCTCAAGAGATGCTCGAGTTTTGGAAAGAAGCAGGGGTATCATGAAGTGGGTCTTCCTGATGATGTTCCAAAAGGCCACTTTGCTGTCTATGTTGGGGAAAACAGAACCAGATACATCATCCCCATTTCGTGGTTGGCTCACCCGCAGTTTCAAACACTGCTCCGGAGAGCTGAGGAGGAGTTTGGCTTCAATCATGATACTGGTCTTACCATCCCTTGTGATGAAGTTGCTTTTGAGAACCTCACCTCGATGATCAGATAA 477 0.4591 MPLFLTLSSLPHPPNHKYLSSLPPPQSRSLSLSLYIYIYLPPRQEHSKLKKLPFMAIKKANKLPQPVVLKQILKRCSSFGKKQGYHEVGLPDDVPKGHFAVYVGENRTRYIIPISWLAHPQFQTLLRRAEEEFGFNHDTGLTIPCDEVAFENLTSMIR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0177 158 Pfam Auxin responsive protein 88 157 IPR003676 GO:0009733
Prci10g0177 158 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 91 156 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0177 Prci-Chr10 1130318 1131793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0177 53 153 Calmodulin-binding Proteins AT5G20810 41.584 3.13e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0177 K14488 - gmx:100798840 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0177 10 1130318 1131793 Prci5g0011 5 462367 464654 CCT
Prci10g0177 10 1130318 1131793 Prci10g0177 10 1130318 1131793 ECH