Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0169 ATGGAGCCTCAGCAGCAACAAGCAGCAAACGAGGATGCTGGGGGGAGTGGAAAAGGAGGGTATTTGTGCAGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGGATCTCTGCAAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCTCGTGAGCGCCAGAAGAAGCGCTTCACTTCCACCTCTGACCATCTCCCCGGTCCCATGCATTTGCAAAGACCCCCTTCTTCTACTACTACCAACATTCCTCCACCTGCTAATTGGAAGCCTGATCACGATTCCATTCTTCACTCCAAGTATTCTAACATGCCACCATCTCACGGCGTTTCTTCTGCATCATCTTCTACTGCTGGGATGGTTACTCTGGGCCAGATGGCGAACTATGGGTATGGATCTGTGACTATGGAGAAGTGTTTTAGGGACTGCTCAATATCAGCAGGAGGAAGCAGTGGCACCATAAGCCACAATTTGGGATGGGTAGGTATGGATCCGTACTCAAACTACACTAACTTCTTGGACAAAGTAAGGCCTGGCGATCAAGAAACCCTGAAGGGAGAACAAGAAGGAGACGATGGAGCTCCTGAGATTGAAACCCTCCCTCTGTTCCCCATGCACGGCGAGGACATCCACGGCTACTGCAACCTCAGGTCTGATTCTGCTTACTATGGCGGTGGTTGGTATCACGCCGATGAATATGGCTTCAAGAACAATGGCTCTCACCGTACTTCTCTAGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGACTCAACTTGA 882 0.5 MEPQQQQAANEDAGGSGKGGYLCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSTSDHLPGPMHLQRPPSSTTTNIPPPANWKPDHDSILHSKYSNMPPSHGVSSASSSTAGMVTLGQMANYGYGSVTMEKCFRDCSISAGGSSGTISHNLGWVGMDPYSNYTNFLDKVRPGDQETLKGEQEGDDGAPEIETLPLFPMHGEDIHGYCNLRSDSAYYGGGWYHADEYGFKNNGSHRTSLELTLNSYTRRSPDST 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0169 293 CDD homeodomain 28 90 IPR001356 GO:0003677
Prci10g0169 293 SMART HOX_1 25 93 IPR001356 GO:0003677
Prci10g0169 293 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 6 287 IPR044555 GO:0003700|GO:0099402
Prci10g0169 293 MobiDBLite consensus disorder prediction 87 148 - -
Prci10g0169 293 SUPERFAMILY Homeodomain-like 21 93 IPR009057 -
Prci10g0169 293 ProSiteProfiles 'Homeobox' domain profile. 23 89 IPR001356 GO:0003677
Prci10g0169 293 Gene3D - 27 93 - -
Prci10g0169 293 MobiDBLite consensus disorder prediction 1 28 - -
Prci10g0169 293 MobiDBLite consensus disorder prediction 133 148 - -
Prci10g0169 293 Pfam Homeodomain 27 88 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0169 Prci-Chr10 1093029 1094648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0169 21 242 Wox Gene Family AT2G17950 42.520 3.81e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci10g0169 Homeodomain 1.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0169 - - gmx:100803815 376.711