Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0164 ATGGATCGGTGGAAACCTGAAGATTTGTCTAAATTCGCATCTGTTGCAGCAGATTTAGCGCCTTCTTCGCTTCAGCCTCAGTCTCAACTTGTTACTGTCACCTCTAACCGCTTGCAGAATTCGCATACCGAATCCAGGCACAGGCCTGAAGCTGAAGCACAGGATCCAGTTGCTGCAAGAAAACTTCAAAAGGCGGACCGCGAGAAACTGAGGAGGGATCGACTAAATGAGCATTTCCTAGAGCTGGGAAACACATTAGATCCAGATAGGCCAAAGAATGACAAGGCCACTATCCTTACAGACACAATTCAGGTGCTAAAAGATTTATCTGCTGAAGTCGATAGACTAAAAGCTGAGCATGCAGCACTTTCTGAAGAATCACATGAACTAATGCAGGAGAAAAATGAACTCAGAGAAGAGAAGATATCTCTAAAATCTGACATTGAAAATCTTAATTCACAGTATCAGCAGAGAGTCAGAGTCACGTTCCCGTGGACTGCAATTGATCATTCAGTTGTCATGGCTCCACCGTATTCATATCCAGTTCCTATACCCATTTCTTCCGGTCCAATTTCCCTCCATCCATCACTTCAACCTTTTCCTTTCTTTGGAAACCAAAGTCCAGGTCCGATTCCCAATCCTTGTTCCACATATGTCCCCTTTTCTGCTCCAGTTAATCCCCCAGTCGAGCAGCCAACTGGCCAGTATGCTTCGACGTCCAACACTTCAAGCAAACAAGATTCCAGAAGTAAGTCGCCAGATCATGAAAGGACTGGCAATGCTGAAAGATGTCGTGAGTCTAACGATGTTGCTACCAAGCTTGAACTTAAGATTCCTGGATCATCATCGCAACAGGAATCATCTTGTGGAGCGAGGAAGGGCAAGCATTCATTAAGGAGGGCGAGAAACATCACCGATGGGAGTACTTCAAGCAGGCATTCTTCGTCTCAAGGACCTCAAGATAGCTCTAACAGCGTGGGTGACAACCCGAAGTCTGATAAATGA 1005 0.4547 MDRWKPEDLSKFASVAADLAPSSLQPQSQLVTVTSNRLQNSHTESRHRPEAEAQDPVAARKLQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQVLKDLSAEVDRLKAEHAALSEESHELMQEKNELREEKISLKSDIENLNSQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPISSGPISLHPSLQPFPFFGNQSPGPIPNPCSTYVPFSAPVNPPVEQPTGQYASTSNTSSKQDSRSKSPDHERTGNAERCRESNDVATKLELKIPGSSSQQESSCGARKGKHSLRRARNITDGSTSSRHSSSQGPQDSSNSVGDNPKSDK 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0164 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 60 130 IPR036638 GO:0046983
Prci10g0164 334 MobiDBLite consensus disorder prediction 222 334 - -
Prci10g0164 334 CDD bHLH_AtILR3_like 64 138 - -
Prci10g0164 334 MobiDBLite consensus disorder prediction 23 40 - -
Prci10g0164 334 MobiDBLite consensus disorder prediction 277 291 - -
Prci10g0164 334 MobiDBLite consensus disorder prediction 228 247 - -
Prci10g0164 334 SMART finulus 65 115 IPR011598 GO:0046983
Prci10g0164 334 Coils Coil 99 154 - -
Prci10g0164 334 PANTHER TRANSCRIPTION FACTOR BHLH121 25 332 IPR044579 GO:0003700|GO:0006879
Prci10g0164 334 MobiDBLite consensus disorder prediction 248 272 - -
Prci10g0164 334 MobiDBLite consensus disorder prediction 23 68 - -
Prci10g0164 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 109 IPR011598 GO:0046983
Prci10g0164 334 MobiDBLite consensus disorder prediction 41 68 - -
Prci10g0164 334 Gene3D - 57 138 IPR036638 GO:0046983
Prci10g0164 334 Pfam Helix-loop-helix DNA-binding domain 60 109 IPR011598 GO:0046983
Prci10g0164 334 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0164 Prci-Chr10 1055312 1059133 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0164 50 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 56.432 5.00e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci10g0164 HLH 8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0164 - - zju:107424369 418.313