Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0163 ATGTATCTTATGTCAAAGAGAAACTTTAGAAAAATAAGAAAAGATTTAGCGCCTTCTTCGCTTCAGCCTCAGTCTCAACTTGTTACTGTCACCTCTAACCGCTTGCAGAATTCGCATACCGAATCCAGGCACAGGCCTGAAGCTGAAGCACAGGATCCAGTTGCTGCAAGAAAACTTCAAAAGGCGGACCGCGAGAAACTGAGGAGGGATCGACTAAATGAGCATTTCCTAGAGCTGGGAAACACATTAGATCCAGATAGGCCAAAGAATGACAAGGCCACTATCCTTACAGACACAATTCAGGTGCTAAAAGATTTATCTGCTGAAGTCGATAGACTAAAAGCTGAGCATGCAGCACTTTCTGAAGAATCACATGAACTAATGCAGGAGAAAAATGAACTCAGAGAAGAGAAGATATCTCTAAAATCTGACATTGAAAATCTTAATTCACAGTATCAGCAGAGAGTCAGAGTCACGTTCCCGTGGACTGCAATTGATCATTCAGTTGTCATGGCTCCACCGTATTCATATCCAGTTCCTATACCCATTTCTTCCGGTCCAATTTCCCTCCATCCATCACTTCAACCTTTTCCTTTCTTTGGAAACCAAAGTCCAGGTCCGATTCCCAATCCTTGTTCCACATATGTCCCCTTTTCTGCTCCAGTTAATCCCCCAGTCGAGCAGCCAACTGGCCAGTATGCTTCGACGTCCAACACTTCAAGCAAACAAGATTCCAGAAGTAAGTCGCCAGATCATGAAAGGACTGGCAATGCTGAAAGATGTCGTGAGTCTAACGATGTTGCTACCAAGCTTGAACTTAAGATTCCTGGATCATCATCGCAACAGGAATCATCTTGTGGAGCGAGGAAGGGCAAGCATTCATTAAGGAGGGCGAGAAACATCACCGATGGGAGTACTTCAAGCAGGCATTCTTCGTCTCAAGGACCTCAAGATAGCTCTAACAGCGTGGGTGACAACCCGAAGTCTGATAAATGA 996 0.4458 MYLMSKRNFRKIRKDLAPSSLQPQSQLVTVTSNRLQNSHTESRHRPEAEAQDPVAARKLQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILTDTIQVLKDLSAEVDRLKAEHAALSEESHELMQEKNELREEKISLKSDIENLNSQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPISSGPISLHPSLQPFPFFGNQSPGPIPNPCSTYVPFSAPVNPPVEQPTGQYASTSNTSSKQDSRSKSPDHERTGNAERCRESNDVATKLELKIPGSSSQQESSCGARKGKHSLRRARNITDGSTSSRHSSSQGPQDSSNSVGDNPKSDK 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0163 331 CDD bHLH_AtILR3_like 61 135 - -
Prci10g0163 331 MobiDBLite consensus disorder prediction 274 288 - -
Prci10g0163 331 MobiDBLite consensus disorder prediction 300 324 - -
Prci10g0163 331 MobiDBLite consensus disorder prediction 18 37 - -
Prci10g0163 331 MobiDBLite consensus disorder prediction 225 244 - -
Prci10g0163 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 56 106 IPR011598 GO:0046983
Prci10g0163 331 Coils Coil 96 151 - -
Prci10g0163 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 57 127 IPR036638 GO:0046983
Prci10g0163 331 MobiDBLite consensus disorder prediction 245 269 - -
Prci10g0163 331 Pfam Helix-loop-helix DNA-binding domain 57 106 IPR011598 GO:0046983
Prci10g0163 331 MobiDBLite consensus disorder prediction 38 66 - -
Prci10g0163 331 MobiDBLite consensus disorder prediction 14 66 - -
Prci10g0163 331 PANTHER TRANSCRIPTION FACTOR BHLH121 22 329 IPR044579 GO:0003700|GO:0006879
Prci10g0163 331 Gene3D - 54 135 IPR036638 GO:0046983
Prci10g0163 331 MobiDBLite consensus disorder prediction 219 331 - -
Prci10g0163 331 SMART finulus 62 112 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0163 Prci-Chr10 1055279 1059133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0163 47 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 56.432 4.99e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci10g0163 HLH 7.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0163 - - zju:107424369 411.764