Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0161 ATGCTTCCTTTTTCTCGCCCTCCCCCGCTTCCCGCCACCTGTTTCTCCGGCAAGTCTGTTTCCCCTTCGCCGCCGACCTCTCCTCATCCCACCCCAATCCGTCTGATCGCCGCCTCCGCCACTGCGACGGAATCTCGCTCTGCCTGGACGGAGCAACCGAAATCCAGATCCTCCTATCTGAGCTCCAGCTGTGTGTCTTCGTGCACGTCGCTGTATGAGATTCTGGGAATTCCGGCGGGAGCGTCTCTTCAGGAGATTAAGGCGGCCTACAGGCGGTTAGCCAGAGTGTGCCATCCGGACGTGGCGGCGGTGGATCGGAAGGATTCGTCGGCGGACGAGTTTATGAAGATTCACGCTGCCTACTCCACCCTGTCGGACCCCGAAAAGCGCGCCACCTACGACAGGAGCCTCTTCGTCCGTCGACAGAGGCCTTTGTCCGCCTCGTCGGCATACTCCGGTTACAGCGGCCGGAACTGGGAAACGGACCAGTGTTGGTAG 498 0.6084 MLPFSRPPPLPATCFSGKSVSPSPPTSPHPTPIRLIAASATATESRSAWTEQPKSRSSYLSSSCVSSCTSLYEILGIPAGASLQEIKAAYRRLARVCHPDVAAVDRKDSSADEFMKIHAAYSTLSDPEKRATYDRSLFVRRQRPLSASSAYSGYSGRNWETDQCW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0161 165 ProSitePatterns Nt-dnaJ domain signature. 114 133 IPR018253 -
Prci10g0161 165 Pfam DnaJ domain 71 134 IPR001623 -
Prci10g0161 165 SUPERFAMILY Chaperone J-domain 66 140 IPR036869 -
Prci10g0161 165 CDD DnaJ 72 126 IPR001623 -
Prci10g0161 165 Gene3D DnaJ domain 55 156 IPR036869 -
Prci10g0161 165 SMART dnaj_3 69 129 IPR001623 -
Prci10g0161 165 MobiDBLite consensus disorder prediction 1 32 - -
Prci10g0161 165 ProSiteProfiles dnaJ domain profile. 70 137 IPR001623 -
Prci10g0161 165 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 30 161 - -
Prci10g0161 165 PRINTS DnaJ domain signature 90 105 IPR001623 -
Prci10g0161 165 PRINTS DnaJ domain signature 72 90 IPR001623 -
Prci10g0161 165 PRINTS DnaJ domain signature 109 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0161 Prci-Chr10 1038976 1039716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0161 60 134 C2H2 Transcription Factor Family AT1G74250 40.506 2.13e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0161 - - aip:107642575 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0161 10 1038976 1039716 Prci10g0161 10 1038976 1039716 ECH