Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0146 ATGCTAGCCATCTTGATTGGGCTGCTCACTATATTAACATGGCATTTCACGAAGAGTTATACGGCAAAATCACTTGATAACTTAGCATATGGGCTTCGTTATGAATTACTGCAACGTCCCATCTTACGGATGTGGAATATTTTGAATTCTACTGCTGAAATTACAAAAGCTCAGGTTGAGCTGTCTGAATATGTAATCAGACGATACAGCAACCCCGCCAATCAAGCAGAACAAGTTGAGCAGCTGTACGAAGCTATGAGGTCTGTAACCTGGGCCCTCTTTTCCAGTCGCAAGGCACTCAATTCAATAACGATCAATTACAGGAATGGCTTTGTTCAGGCATTCCACAGAGATCTTAAGGATAACAATACATTTTACATCTACTCTGATCTTGCAAACTACTCTATAGGTGCCAGTGCCGCTAATGAGATGAAATCACTCTCAACACATCAAGCTTGGAACGATGAAGCCATTCGTGGTAACAGTTCTGCAAATTGGTATCGTGAACCACTTGACCCTCTTAGTGGTGAGAAGATTGGAAAAGCTAAGAAGATTGCACCAGAAGACTTGATTAATATTGCTGGCCTTTCTCAAGTCCCTGATGGGGCAGCTTCATGGCATGTTGCTGTGAGCAAGTTTACGGATTCACCATTGCTTTCTGCGGCGCTGCCAGTTTGGGACTCTTCTAATAAGAGCATTGTGGCAGTTGTGGGTGTCACTACCGCACTTTATAGTGTTGGGCAGCTAATGAAAGAACTAGTTGAATTTCATAGTGGTTATATCTATTTGACCTCCCTAGAGGGTTACTTACTTGCCACTTCCACTAATGCTCCACTGCTGACATACTCAAAGCCTCTCAAGCTTAAGATGGCTGTTGATTGTGAAGATGATGTGATACGATTGGGAGCCCAGTGGCTAAAGAGAACCTATGGGAAGAATTTTCCTCCAAGTCATGGGGTTCACGTCGAGAATGTTGAGCTAGGTCGTCAGCAATATTACATCGACTCATTCTTTCTAAATTTGAAGAGGCTTCCTCTGGTGGGTGTTATCATTATTCCAAGAAAGTATATTATGGGGAAGGTTGATCAAAGAGCCTTCAAAACATTGGTTATTCTGATATCTGCATCGTTGTGTATTCTAGTCATTGGATGTGTTTGCATTTTAATTCTGACAAACGGGGTATCAAAGGAAATGAAACTAAGAGCAGAACTAATCAGTCATCTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAACTATAAAAGTCAGTTTCTTGCAAACATGAGTCATGAATTGAGGACACCTATGGCAGCAGTGATTGGGTTGCTTGACATTCTTATATCTGATGATTGTCTTACAAATGAACAATATGCAACAGTTTCTCAGATCAGAAAATGCTCAACTGCCTTACTCCGTCTTCTTAACAACATATTGGATCTCAGCAAGGTGGAATCTGGAAAATTGGTGTTAGAAAATGCAGAATTTGACTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTGCAATGCATTAACCACAACGTAGAGACTGTTTTGGACCTATCAGATGATATGCCAAAGGTAGTTCAAGGTGATTCTGCTAGGGTTGTTCAAATTTTCGCAAATTTGATCAACAATTCAATTAAGTTTACTCCATCTGGTCACATTATTCTTCGAGGATGGTGCGAGAACCCAAATTGTTCCAGTGATAGCCCAATTCTTCCTCTTAATCAGAAGTCCCGGACTCCACAAAAGACCAGAATGAAGCAACAAGAAAACCATGCAAAGAAGGCATCTAAAAAAGACAGCCAAATAATTCTTTGGTTTGAAGTAGATGACACAGGCTGTGGTATTGATCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCAGATCCATCAACCACCAGGCTGCATGGAGGCACCGGTCTTGGGCTTTGCATTGTGAGAACCTTGGTCAATAAAATGGGTGGAGAAATCAAGGTTGTCAAAAAGGAAGGCCCAGGAACCTTAATGCGGTTGTACCTGCTTCTCACTACACCCATGGATGCCACAGAACAACATTGTCAAATAGGTTATGCGGAGAGTGGCTTAGTGGTATTGCTTGCACTACATGGAGACACGAGTCGGTCTATCACATCTAGTTGGTTACAGAAAAATGGGGTTTGCACTCTGCAGGCATCTGAATGGAATGAACTGACACAAATTCTTAGGGAACTCTTCCATGCAAGTTCAGTCCAAAATAATGGCTTTGATGCACATTATGCAGTAAATAAGAGTTGGAAGTCCAAATTACTCAACATAGAAGAAATGAGGAACCCAGCATTTGTCATTATAGTGGACATAGGGCTGCTTGATTTGAGCACAGATATATGGAAGGAACAGCTCAACTTCCTTCACAAGTACTTTGGGAGAACAAAGTTCGCATGGGTGCTAAGTCACGATACCTCTAATACCATAAAGATGGAGCTTCGCAGGATGGGGCATATATTGATGGTCAACAAGCCCCTCTACAAAACCAAAATGTTTCATATTCTGGAAGCTGTCATAAAGGAGAGAAATATTGAGCTGCAAAAGAAAATTTTGACTGCTTCGAGAACCACAACGAAAGAGGATGATGCACACGAGTTTCTGGAGATTGATTCTACTCATTTTGATGGTGTTAGCTCTGATGGTTCTGACATATCCGAAAACGGTGCTTCTAATAGTGCCAATGTTGCTAAACAAAGGGAAAAAATTGTAAAATCCCATCCACCATCACAGTACAACATAAACAACTGCTTAGTTGGATTAGCCAATGAATATGCGGAAGATAACATTTCAAGGAAAGAAGAATCATGTCAGAGCAGCCCCAGCTGCCGTGACATCCTGGAAGACATGGAACCAAAATTACAAGGACCCTTTCCAACAGAAGCTCAAGGAAAAGATTCTGATTCTGTGAAAACATTTAGTGTCACTTGCTCAAGTAAAACTGTTAATGGAAAGAAATCTCTTGAAGGTTTAAGGATATTGCTTGCAGAAGACACTCCAGTGCTTCAAAGAGTTGCAACCATAATGTTGGAAAAAATGGGAGCTACAGTTGTTGCTGTAGGTGATGGACAGCAGGCTGTGGATGCTCTGAATTGCATGCTCGGCGCTGAAGATAGTAGAAGGGAGTCTCTAATGAAGGAGAGAAGCACAATATCTCAAACAGAAATTTTCAGTTGTACGCCTTATGACTTGATTCTAATGGATTGTCAGATGCCGAAGATGGATGGTTATGAAGCCACGAAAGCAATCAGGAAATCAGAAGCAGGAACTGGCTCGCACATTCCCATAGTTGCTCTTACAGCCCATGCAATGTCATGTGATGAAGCTAAGTGCCTGGAGGTGGGCATGGATGCTTATTTAACAAAGCCAATTGACTTCAAGCTAATGGTGTCCACCATTCTTTCACTCACTAGAACAACATCCTGA 3468 0.4175 MLAILIGLLTILTWHFTKSYTAKSLDNLAYGLRYELLQRPILRMWNILNSTAEITKAQVELSEYVIRRYSNPANQAEQVEQLYEAMRSVTWALFSSRKALNSITINYRNGFVQAFHRDLKDNNTFYIYSDLANYSIGASAANEMKSLSTHQAWNDEAIRGNSSANWYREPLDPLSGEKIGKAKKIAPEDLINIAGLSQVPDGAASWHVAVSKFTDSPLLSAALPVWDSSNKSIVAVVGVTTALYSVGQLMKELVEFHSGYIYLTSLEGYLLATSTNAPLLTYSKPLKLKMAVDCEDDVIRLGAQWLKRTYGKNFPPSHGVHVENVELGRQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDQRAFKTLVILISASLCILVIGCVCILILTNGVSKEMKLRAELISHLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYATVSQIRKCSTALLRLLNNILDLSKVESGKLVLENAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVQGDSARVVQIFANLINNSIKFTPSGHIILRGWCENPNCSSDSPILPLNQKSRTPQKTRMKQQENHAKKASKKDSQIILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRTLVNKMGGEIKVVKKEGPGTLMRLYLLLTTPMDATEQHCQIGYAESGLVVLLALHGDTSRSITSSWLQKNGVCTLQASEWNELTQILRELFHASSVQNNGFDAHYAVNKSWKSKLLNIEEMRNPAFVIIVDIGLLDLSTDIWKEQLNFLHKYFGRTKFAWVLSHDTSNTIKMELRRMGHILMVNKPLYKTKMFHILEAVIKERNIELQKKILTASRTTTKEDDAHEFLEIDSTHFDGVSSDGSDISENGASNSANVAKQREKIVKSHPPSQYNINNCLVGLANEYAEDNISRKEESCQSSPSCRDILEDMEPKLQGPFPTEAQGKDSDSVKTFSVTCSSKTVNGKKSLEGLRILLAEDTPVLQRVATIMLEKMGATVVAVGDGQQAVDALNCMLGAEDSRRESLMKERSTISQTEIFSCTPYDLILMDCQMPKMDGYEATKAIRKSEAGTGSHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKLMVSTILSLTRTTS 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0146 1155 SMART HisKA_10 420 486 IPR003661 GO:0000155|GO:0007165
Prci10g0146 1155 CDD HisKA 421 482 IPR003661 GO:0000155|GO:0007165
Prci10g0146 1155 SMART REC_2 1005 1147 IPR001789 GO:0000160
Prci10g0146 1155 FunFam Histidine kinase 1-like protein 408 487 - -
Prci10g0146 1155 Gene3D - 408 487 - -
Prci10g0146 1155 Pfam Response regulator receiver domain 1007 1146 IPR001789 GO:0000160
Prci10g0146 1155 Pfam His Kinase A (phospho-acceptor) domain 421 486 IPR003661 GO:0000155|GO:0007165
Prci10g0146 1155 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 407 487 IPR036097 GO:0000155|GO:0007165
Prci10g0146 1155 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 475 680 IPR036890 -
Prci10g0146 1155 ProSiteProfiles Histidine kinase domain profile. 427 684 IPR005467 -
Prci10g0146 1155 MobiDBLite consensus disorder prediction 587 601 - -
Prci10g0146 1155 ProSiteProfiles Response regulatory domain profile. 1006 1151 IPR001789 GO:0000160
Prci10g0146 1155 Gene3D - 987 1152 - -
Prci10g0146 1155 CDD REC_hyHK_CKI1_RcsC-like 1007 1147 - -
Prci10g0146 1155 SUPERFAMILY CheY-like 1003 1152 IPR011006 -
Prci10g0146 1155 SMART HKATPase_4 533 684 IPR003594 -
Prci10g0146 1155 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 692 - -
Prci10g0146 1155 PRINTS Bacterial sensor protein C-terminal signature 644 662 IPR004358 GO:0016310|GO:0016772
Prci10g0146 1155 PRINTS Bacterial sensor protein C-terminal signature 627 637 IPR004358 GO:0016310|GO:0016772
Prci10g0146 1155 PRINTS Bacterial sensor protein C-terminal signature 609 623 IPR004358 GO:0016310|GO:0016772
Prci10g0146 1155 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 533 683 IPR003594 -
Prci10g0146 1155 Gene3D - 488 686 IPR036890 -
Prci10g0146 1155 MobiDBLite consensus disorder prediction 574 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0146 Prci-Chr10 904111 911195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0146 1 1155 Histidine Kinase Gene Family AT2G17820 65.013 0.0 1492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci10g0146 HATPase_c 2.7e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0146 - - gmx:100814068 1806.57