LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g0140	ATGGCGGCTCCTCGTGTTGACCTAGATTATGTCAAGCAGATCGACAAGGCCCGTCGCGACCTTCGCGCTCTCATCTACAGCAAGAACTGCGCTCCTCTCATGCTTCGTTTGGCGTGGCATGACGCTGGAACCTACGATGCCAAGACAAAAACAGGAGGTCCTAACGGGTCAATCAGAAGCGAGCAGGAGTTGAATCACAGCGCAAACAATGGTTTAAAACTAGCAGTGGAACTTTGCCAGGATGTGAAGGTCAAACATTCAAAAATCACATATGCGGATCTGTACCAGCTTGCTGGTGTTGTTGCAGTAGAGATCACCGGGGGCCCAACAATTGACTTCATTCCAGGCAGAAAGGATTTAATGATGTCCCCAGAAGAAGGGCGGCTTCCAGATGCTAAACAAGGTGCAACGCATTTAAGGGAGGTGTTTTATCGCATGGGTCTCACTGATAAAGATATTGTGGCTCTCTCCGGAGGCCACACACTGGGCAAGGCACATAGAGAACGGTCAGGCTTTGAAGGCCCATGGACCAGGGACTACATGAAGTTTGATAATTCCTATTTTAAGGAATTGCTGAGAGAGGAGCCAAGTGACGACAATTTATTGAAGCTTCCCACAGACAAGGCTCTGGCGGAGGATCCTGAGTTCCGCGAGTATGTGGAGCTTTACGCAGAGATTATGCAGCTTCCCACAAGAAACTCTCAGAGCTAG	711	0.4937	MAAPRVDLDYVKQIDKARRDLRALIYSKNCAPLMLRLAWHDAGTYDAKTKTGGPNGSIRSEQELNHSANNGLKLAVELCQDVKVKHSKITYADLYQLAGVVAVEITGGPTIDFIPGRKDLMMSPEEGRLPDAKQGATHLREVFYRMGLTDKDIVALSGGHTLGKAHRERSGFEGPWTRDYMKFDNSYFKELLREEPSDDNLLKLPTDKALAEDPEFREYVELYAEIMQLPTRNSQS	236

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g0140	236	CDD	ascorbate_peroxidase	3	225	-	-
	Prci10g0140	236	FunFam	Cytosolic ascorbate peroxidase	17	134	-	-
	Prci10g0140	236	Pfam	Peroxidase	18	225	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Prci10g0140	236	PANTHER	THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED	7	225	IPR044831	GO:0004601\|GO:0034599
	Prci10g0140	236	Gene3D	-	17	129	-	-
	Prci10g0140	236	Gene3D	Peroxidase, domain 2	130	225	-	-
	Prci10g0140	236	PRINTS	Plant ascorbate peroxidase signature	128	145	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Prci10g0140	236	PRINTS	Plant ascorbate peroxidase signature	31	46	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Prci10g0140	236	PRINTS	Plant ascorbate peroxidase signature	63	87	IPR002207	GO:0004601\|GO:0006979\|GO:0020037
	Prci10g0140	236	PRINTS	Plant ascorbate peroxidase signature	168	192	IPR002207	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 24 entries

Previous1 2 3Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g0140	Prci-Chr10	877355	880022	Dispersed/Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g0140	72	224	Peroxidase	AT4G17690	31.937	1.50e-13	67.0

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g0140	K00434		-	rvl:131302567	378.252

Showing 1 to 1 of 1 entries