Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0138 ATGGCGCCCCCCTCCGTTGGCGATGATTACAAGAAGCAGATTGAAGGGGCTCGTAAAGAACTTAACAATCTGATCAAAGGCGACAAGAACCGCCTCGCTCCTCTCATGCTTCGTTTGGCGTTGCATGACGCTGGAATTTACGGTTTTATTACTGGTGTTGATTATTTGATAAAAAGAGGTCCTAATGGTTCAATAAGAAATAATAAGGTCGAGCGGGATCATCCCTCAAATAAGGGTTTGATAGATGCTATGATTATTTGCGAACGCGTGAAGGAGAACAATGACAAAATCACATACGCGGACCTATACCAGCTTGCTGGTGTTGCTGCGGTTAAGTTGACCGGGGGCCCGGAAATTGAATTTGTTCCCGGCAGAAAGGATTCTACAGAATTTCCAGAACAAGGGCTACTTCCGAATAACAAGCTAGATAAAGCACAGTTGGAGAAAATCACACAACGCATGGGTCTGGAAAAAAAAGACATCGTGGCGTTGTTTGGCGGTCTCCACCAATGGGATCCGCCGTCCCCCGAGCCCGCAAAAACTGAAGGCCAAGCAGCTGGAGACCTCAAGTTTGGCAACTCGTATTTCAAAGGTCTGCAGGACAGGGATAAGGATAACCCTTTATTAAAATTTGGTGAGCATGCATCAACTTACGAAAAGAATGAGGAAGCTTTCAAGAACGATTATAAAGAGGCGCACAGGAAAGTATCGGAGCGAGGCATGCCGGCCAAGGAGGTCGCAAAAAAAGAACAGGAGGCAGAATCTTCTAGGCGTCATCGTGTCAGATTGGTGCAGGGCATCGGAATTGCTGTCGTCACCACTGCCATCATCCTTGGCTTCTTCTTGAGCAGAAGAAACAAGTGA 864 0.4688 MAPPSVGDDYKKQIEGARKELNNLIKGDKNRLAPLMLRLALHDAGIYGFITGVDYLIKRGPNGSIRNNKVERDHPSNKGLIDAMIICERVKENNDKITYADLYQLAGVAAVKLTGGPEIEFVPGRKDSTEFPEQGLLPNNKLDKAQLEKITQRMGLEKKDIVALFGGLHQWDPPSPEPAKTEGQAAGDLKFGNSYFKGLQDRDKDNPLLKFGEHASTYEKNEEAFKNDYKEAHRKVSERGMPAKEVAKKEQEAESSRRHRVRLVQGIGIAVVTTAIILGFFLSRRNK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0138 287 Pfam Peroxidase 18 173 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PRINTS Plant ascorbate peroxidase signature 217 241 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PRINTS Plant ascorbate peroxidase signature 10 30 IPR002207 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PRINTS Haem peroxidase superfamily signature 115 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PRINTS Haem peroxidase superfamily signature 97 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 MobiDBLite consensus disorder prediction 236 257 - -
Prci10g0138 287 ProSiteProfiles Plant heme peroxidase family profile. 31 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 7 247 IPR044831 GO:0004601|GO:0034599
Prci10g0138 287 SUPERFAMILY Heme-dependent peroxidases 10 245 IPR010255 GO:0004601|GO:0006979|GO:0020037
Prci10g0138 287 Gene3D - 18 240 - -
Prci10g0138 287 Gene3D Peroxidase, domain 2 138 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0138 Prci-Chr10 833000 835114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0138 33 167 Peroxidase AT4G30170 32.192 1.77e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0138 K00434 - gmx:100806101 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0138 10 833000 835114 Prci10g0138 10 833000 835114 ECH