Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0117 ATGGAAGAGGTGTGGAGGGACTTGAATCTCGACCACAACGGAGGCTCCAACCCCGCCGATTACCGCCGCTTCATCTTCCAAGACTTCCTCGCTCGATCTCCCTACGATTCTCCCTCTTCCCAGGACATCTCCTCCTCCTCCCTCTCCCCCTCCTCTCCTCTCGTCACCGCCCTCAGCCTCGGCTCCTCCGCCCCTCCCTTCCGCTTCGTCGACCCTCTTCCTCAACCCGCCGCCCACTCCCTCCCCCCGGTCCTTTCGTCTTTTCCTCCTCCTCCTTCCAATCTCTTTCCCTCCTCCCCTTCAGTTTCTGCCTTCCCTCATAAGAGGCCCCTTCCTGAATCTGATCTTACTGATCCCAACCATCCTCACCATTATAACCACGGTGATGGCTCGGGAAGTGAGCGCCACAAGCGTATGATTAAGAACCGGGAATCTGCCGCCAGATCCCGAGCTAGAAAGCAGGAAAAGACTGCCTTCTTGATTCCCTCGCTTTTATTTATGAATCTTCAACATATGTTTGTTTTTGAAATCCATGCGTCTCTCTTGTTTAAAGGTGCTTGGTTTTCCCTCCAGGCTTACACGAACGAGTTGGAGCAGAAGGTCGACTACTTGAACAAAGAAAATGAGAGGCTAAGGAAACAGCAGCAAGAGTGGTCCAAAGCGTCGGCCTCCGAGAAAAAGAAGAATCCTCTGTTTCGGACGTCTACTGCTCCGTTTTGA 720 0.5319 MEEVWRDLNLDHNGGSNPADYRRFIFQDFLARSPYDSPSSQDISSSSLSPSSPLVTALSLGSSAPPFRFVDPLPQPAAHSLPPVLSSFPPPPSNLFPSSPSVSAFPHKRPLPESDLTDPNHPHHYNHGDGSGSERHKRMIKNRESAARSRARKQEKTAFLIPSLLFMNLQHMFVFEIHASLLFKGAWFSLQAYTNELEQKVDYLNKENERLRKQQQEWSKASASEKKKNPLFRTSTAPF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0117 239 MobiDBLite consensus disorder prediction 34 57 - -
Prci10g0117 239 MobiDBLite consensus disorder prediction 111 153 - -
Prci10g0117 239 SUPERFAMILY Leucine zipper domain 135 168 IPR046347 GO:0003700|GO:0006355
Prci10g0117 239 CDD bZIP_plant_BZIP46 135 217 - -
Prci10g0117 239 Pfam Basic region leucine zipper 133 158 IPR004827 GO:0003700|GO:0006355
Prci10g0117 239 Coils Coil 190 221 - -
Prci10g0117 239 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 137 152 IPR004827 GO:0003700|GO:0006355
Prci10g0117 239 MobiDBLite consensus disorder prediction 97 153 - -
Prci10g0117 239 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 238 IPR043452 GO:0003700|GO:0045893
Prci10g0117 239 MobiDBLite consensus disorder prediction 213 239 - -
Prci10g0117 239 Gene3D - 134 161 - -
Prci10g0117 239 MobiDBLite consensus disorder prediction 213 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0117 Prci-Chr10 769860 771109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0117 1 239 bZIP Transcription Factor Family AT3G56850 30.350 4.29e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci10g0117 bZIP_2 3.7e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0117 K14432 - pop:7493988 103.605