Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0107 ATGGATTTTGTGGCGAATCCCTTTCCCTTGCCTTCTTCCTCGCTGGGTTCCTTCGGGAGCTTCGTTGAGAGGGTTAGACGCGGAAGCAGCCTCGCGGTTTCTGTTATAATTGGAAACATCTTCTCTGCGATCTTGACATTTTGCTTTGCCTTAGTGGGAACATTATTGGGGGCCATGACTGGAGCTTTGATAGGCCAAGAGACAGAGAGTGGCTTCATTAGAGGAGCAGCGGTTGGTGCCATATCCGGAGCGGTTTTCTCCATTGAAGTGTTTGAATCTTCTCTTGTTCTCTGGCAATCTGATGAATCTGGGATTGGCTGTCTCTTATATCTGATTGATGTCATTGCTAGCTTACTGAGTGGGAGACTTGTGCGTGAGAGGATTGGCCCTGCCATGTTAAGTGCTGTTCAAAGTCAGATGGGTGCTGTTGAAACAAACTATGATGAAGTTCAAAACATCTTTGACACCGGTGGTTGCAAGGGTTTAACGGGAGATTCCGTTGAAAAGATCCCAAAGATCACAATCACAAGTGATAATAATGTTGATGCTTCGGGCGAAAGAGTTTCTTGTTCAGTCTGCCTCCAGGACTTTCAGCTTGGAGAGACAGTTAGAAGTTTGCCTCATTGCAATCACATGTTCCACCTACCCTGCATAGATAAGTGGCTCTTCAGGCACGGTTCATGTCCGTTATGCAGAAGGGATCTGTAA 708 0.4647 MDFVANPFPLPSSSLGSFGSFVERVRRGSSLAVSVIIGNIFSAILTFCFALVGTLLGAMTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETNYDEVQNIFDTGGCKGLTGDSVEKIPKITITSDNNVDASGERVSCSVCLQDFQLGETVRSLPHCNHMFHLPCIDKWLFRHGSCPLCRRDL 235
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0107 235 SMART ring_2 190 231 IPR001841 -
Prci10g0107 235 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 235 IPR013083 -
Prci10g0107 235 ProSiteProfiles Zinc finger RING-type profile. 190 232 IPR001841 -
Prci10g0107 235 FunFam NEP1-interacting protein-like 1 150 235 - -
Prci10g0107 235 SUPERFAMILY RING/U-box 189 235 - -
Prci10g0107 235 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 21 234 IPR044523 -
Prci10g0107 235 CDD RING-H2_NIPL1-like 189 232 - -
Prci10g0107 235 Pfam Ring finger domain 189 232 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci10g0107 Prci-Chr10 704465 706577 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0107 20 235 C3H Transcription Factor Family AT5G66070 77.315 2.88e-119 337
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0107 - - zju:107424444 404.445