Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0098 ATGGCTGACGGTGTTTCCGGCAATAGTATCTATCTTCACGGAGATTTGGACTTAACAATTATCGAGGCTCGAATGTTACCCAACATGGACATTGTATCTGAGCACTTCCGCCGATGCATCACCGTATGTGACACTATCAAATTCCATTCTTCCGATCACGCTTCCGCCGCCGGCGACCGCACAACCCACCTACGTAAAAAGATCATTACCAGCGACCCTTACGTGACGGTTACGGTCCCACAAGCCACTGTTGCCCGTACACGTGTTATCAAGAATGCTCAAAATCCTTGCTGGGACGAACACTTTAACATCCCCTTGGCACACCCCGTCGTAGATTTGGAATTCCGCGTGAAAGATGACGACATTTTTGGGGCCCAACTCATCGGAACTGTTAAAATTCCTGCGCAGAGGATTGCCTCCGGTGAACGTGTTAGCGGGTGGTTCCCAATTCTTGGATCCTCCGGCGAGCCACCCAAACGCGACGCCGCGCTTCGTATTGAAATGGAGTTCAAACCAGTTGAGAAGAACCCGCTGTATCTTCGCGGCATTGCAAATGATCCCGAGCACAAGGGTGTGAGACACGCGTATTTCCCGTTGCGGAAAGCTAGCTCCGTGAGACTGTACCAAGATGCCCATGTTCCTGAAGGAATGCTACCTAAGATTGAACTCGAGGGAGGGCAGGTTTATAGGCATGAAAAATGTTGGGAAGATATTTGTTATGCTATATCTGAGGCTCATCATATGATATATCTCGTGGGTTGGTCAATCTACCACAAAATAAAACTGGTGAGGGAGCCATCCAGACCTTTGCCACGAGGTGGAGATTTAACTCTTGGTGAATTGCTCCAATACAAGTCTCAAGAAGGGGTTCGAGTTCTGTTACTGGTTTGGGATGATAAAACTTCCCACGATAAGTTGTTCTTCAAGTCGGCTGGAGTAATGCAGACACATGATGAAGAAACCAAAAAGTTCTTTAAACATTCTTCCGTTATGTGTGTATTAGCACCTCGGTATGCTAGCAGCAAGTTGAGCATTATAAAGCAACAGGTTGTTGGAACTGTCTTCACACACCACCAGAAATGTGTTATTGTGGACACACAGGCTTCTGGTAATGATAGGAAAATAACTGCTTTTTTAGGAGGGCTTGATCTATGTGATGGTCGCTATGACACACCTGAGCATAGACTTCTTCGTGATCTTGACACTGTTTTTTCGGGGGATTTCCACAACCCTACATTTCCTGCTGGAAAGAGGGCTCCAAGGCAACCATGGCATGATTTGCATTGCAGAATTGATGGGCCTGCTGCATATGACGTTCTTATTAATTTTGAGCAGCGTTGGAGAAAAGCAACTAAGTGGAAAGAGTTTGCAATGCTTGTCAAAAAGGCTTCTCATTGGCATGAGGATGCTTTAATAAAAGTAGATCGCATATCATGGATATTAAGTCCTTTTGTGCCTCCTTCAAAGGATGGTAGCACAACTGTACCAGGAGATGACCCTGCAGTGTGGGTTACCAGCGAGGATGATCCTGAAAACTGGCACGTTCAGATCTTCCGCTCCATTGACTCAGGGTCCCTGAAAGGGTTTCCAAAAAATGTTCATGCTGCCCAGTCCCAGAATCTTACCTGCGCTAAAAATTTGGTAATAGATAAAAGCATTCAAACAGGATACATCCAGGCAATCAGATCTGCTCAACATTTTATTTATATAGAAAATCAATATTTCATTGGATCGTCATATGCATGGCCATCTTATAAAGATGCAGGGGCTGATAATCTTATCCCAATGGAATTGGCGCTGAAAATAGCTAATAAAATCAGAGCTAAGGAAAGATTTGCCGTGTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCTAATTCCACAGCTATGCAAGAAATTCTGTTTTGGCAGGGCCAAACAATGCAAGTGATGTATAAGGTTGTGGCTGAAGAATTGAAATCAATGCAACGTGATGACTTGCATCCACAAGATTTCCTCAACTTCTATTGTCTTGGTAATCGGGAGGAATTTCATGAAGATGCCTTGAACTCAAATGGTGCTGCTATTTATGGTTACAGAATGTCACTGTGGAGCGAGCATCTTGGGCTTGGGGGTACAGAAACATGTTTCAAGGAGCCAGAGAGTTTGGAATGTGTCAAGAAAGTGAATGAAATTGCTAGCGAAAACTGGAGCAAGTTCACTTCCGAGAACTTCTCACAGCTGCAGGGGCATTTGCTCAAGTATCCTGTACAGGTGGATGCTGCTGGGAATGTAAGCCCCCTAGCTGGACATGAAAATTTCCCGGACGTTGGCGGTAGAGTACTTGGGACATGTTCCCAAACGATTCCAGATATCCTAACAACGTAA 2370 0.4494 MADGVSGNSIYLHGDLDLTIIEARMLPNMDIVSEHFRRCITVCDTIKFHSSDHASAAGDRTTHLRKKIITSDPYVTVTVPQATVARTRVIKNAQNPCWDEHFNIPLAHPVVDLEFRVKDDDIFGAQLIGTVKIPAQRIASGERVSGWFPILGSSGEPPKRDAALRIEMEFKPVEKNPLYLRGIANDPEHKGVRHAYFPLRKASSVRLYQDAHVPEGMLPKIELEGGQVYRHEKCWEDICYAISEAHHMIYLVGWSIYHKIKLVREPSRPLPRGGDLTLGELLQYKSQEGVRVLLLVWDDKTSHDKLFFKSAGVMQTHDEETKKFFKHSSVMCVLAPRYASSKLSIIKQQVVGTVFTHHQKCVIVDTQASGNDRKITAFLGGLDLCDGRYDTPEHRLLRDLDTVFSGDFHNPTFPAGKRAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATKWKEFAMLVKKASHWHEDALIKVDRISWILSPFVPPSKDGSTTVPGDDPAVWVTSEDDPENWHVQIFRSIDSGSLKGFPKNVHAAQSQNLTCAKNLVIDKSIQTGYIQAIRSAQHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKIANKIRAKERFAVYIVLPMWPEGDPNSTAMQEILFWQGQTMQVMYKVVAEELKSMQRDDLHPQDFLNFYCLGNREEFHEDALNSNGAAIYGYRMSLWSEHLGLGGTETCFKEPESLECVKKVNEIASENWSKFTSENFSQLQGHLLKYPVQVDAAGNVSPLAGHENFPDVGGRVLGTCSQTIPDILTT 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0098 789 ProSiteProfiles C2 domain profile. 1 148 IPR000008 -
Prci10g0098 789 SUPERFAMILY Phospholipase D/nuclease 550 648 - -
Prci10g0098 789 SUPERFAMILY Phospholipase D/nuclease 195 459 - -
Prci10g0098 789 Pfam Phospholipase D C terminal 709 778 IPR024632 -
Prci10g0098 789 Pfam C2 domain 14 150 IPR000008 -
Prci10g0098 789 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 173 IPR035892 -
Prci10g0098 789 SMART C2_3c 15 147 IPR000008 -
Prci10g0098 789 Gene3D Endonuclease Chain A 507 691 - -
Prci10g0098 789 Gene3D Endonuclease Chain A 222 472 - -
Prci10g0098 789 Gene3D C2 domain 13 183 IPR035892 -
Prci10g0098 789 Pfam Phospholipase D Active site motif 353 388 IPR001736 GO:0003824
Prci10g0098 789 CDD C2_plant_PLD 10 170 - -
Prci10g0098 789 PANTHER PHOSPHOLIPASE D 8 679 IPR015679 -
Prci10g0098 789 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 353 388 IPR001736 GO:0003824
Prci10g0098 789 FunFam Phospholipase D delta 225 469 - -
Prci10g0098 789 PIRSF PLD_plant 1 689 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Prci10g0098 789 PIRSF PLD_plant 680 789 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0098 Prci-Chr10 625800 641120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0098 1 690 Phospholipase D Gene Family (Wang group) AT4G35790 69.871 0.0 1036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0098 K01115 - gmx:100814486 1146.72