Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0090 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTACAGTCACCGCAAGCTCATCCTCGTCAACACAGGAAGAAATTGGAGGTGTACAATGAGGTGCTTCGTCGAACTCAAGAGTCAAATTATGAGGAGGCCAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGACGTGAATGTGGAGAGGGCGGAAGATGTCCTTAGTCACAAGAGATTGCTGAAGTTGGCAGAGGACCCCGCTAAGCGTCCTGTATTTCAAGTTCGATCAGTGCAGGTATATCCTTATGGATGTGCTTATTTTGCTGACTCAACACATTCTGATCCTTCTGAGAAAGAAGATGCGCAGAGTTCTTTTAACTATTCTTTTAAGCAGGGAGTTCATCCACCACCTACTTTTGGTTCATCTTCTAATCTTGAAGCTCTCTCCCGCCAAGCATGTAAGAATAAGGCTGAAGACAGGGACGAAGATATGGATTTGACACCATGCTTTTACAAGCCCATGCACGAGATTACCTTTTCAACTGTTGACAAGCCCAAAGTCCTTAGTCAGCTGATGACATATTTCATGCTATCAACTACAAATGCTACCAAATGTAGACATTGCAAAACCAGCTGTTCGAAGTTTTCTTTGAAAAGTGTCACAACTTTCCTGAGTATTCATATAACATGTCTTGCACAAATAGACCATTTAACTTCATTACTTGGGGAAATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCAAAGATGGGTTTTCTCTTGATGTCTTTGTTGTCGTGGGGTGGCCAAACGAGGAAACTGAGGAGCTTAAACGTGTATTGGAAAAGGAGATTTTGAAGTTTAAGAGGGAGCAACATCTATCGAAGCAGGGCGTGCCTTCTGCTGCCATTGAACATTATCATGAGGCAAGGATGGAACCCTTCCCTCATTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCAGCTGAAGTTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGTAATTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGACTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTACATCATGAGGAAAATTCGACACAAGAATGTTGTGCAGTTCATTGGAGCATGCACTCAGCCACCAAATCTATGTATTGTCACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTTCCTTCTTTACTTAAGGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTGCCTTATGCTTACCTGTCCCCATTACAAGCGGCAGTAGGCGTGGTGCAGAAGGGTCTACGACCTTCAATCCCCAAGAATGCACACCCAAGGCTATCTGAACTGCTCCGGCGATGTTGGCAGCAAGATCCAATTGAGAGACCGAATTTCTCAGAAATATTGGAAATTCTTCAGCAGATAGCGAAGGAGGATGCAGACGATCGACCCAAGGATAAATCATCTCATGGTTTTCTCTCGGCACTAAGACGGGCCCATCAGTAA 1869 0.4366 MAIEEDLESCGSRACVQSPQAHPRQHRKKLEVYNEVLRRTQESNYEEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPAKRPVFQVRSVQVYPYGCAYFADSTHSDPSEKEDAQSSFNYSFKQGVHPPPTFGSSSNLEALSRQACKNKAEDRDEDMDLTPCFYKPMHEITFSTVDKPKVLSQLMTYFMLSTTNATKCRHCKTSCSKFSLKSVTTFLSIHITCLAQIDHLTSLLGEMGLNIQEAHAFSTKDGFSLDVFVVVGWPNEETEELKRVLEKEILKFKREQHLSKQGVPSAAIEHYHEARMEPFPHCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGNYCSQDVAIKVLKTDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLSPLQAAVGVVQKGLRPSIPKNAHPRLSELLRRCWQQDPIERPNFSEILEILQQIAKEDADDRPKDKSSHGFLSALRRAHQ 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0090 622 Gene3D Phosphorylase Kinase; domain 1 333 422 - -
Prci10g0090 622 Coils Coil 279 299 - -
Prci10g0090 622 PRINTS Tyrosine kinase catalytic domain signature 501 511 IPR001245 GO:0004672|GO:0006468
Prci10g0090 622 PRINTS Tyrosine kinase catalytic domain signature 455 473 IPR001245 GO:0004672|GO:0006468
Prci10g0090 622 PRINTS Tyrosine kinase catalytic domain signature 418 431 IPR001245 GO:0004672|GO:0006468
Prci10g0090 622 PRINTS Tyrosine kinase catalytic domain signature 520 542 IPR001245 GO:0004672|GO:0006468
Prci10g0090 622 PRINTS Tyrosine kinase catalytic domain signature 564 586 IPR001245 GO:0004672|GO:0006468
Prci10g0090 622 FunFam Serine/threonine-protein kinase isoform 1 334 422 - -
Prci10g0090 622 Gene3D Transferase(Phosphotransferase) domain 1 423 616 - -
Prci10g0090 622 SUPERFAMILY Protein kinase-like (PK-like) 323 593 IPR011009 -
Prci10g0090 622 MobiDBLite consensus disorder prediction 599 622 - -
Prci10g0090 622 Pfam Protein tyrosine and serine/threonine kinase 344 593 IPR001245 GO:0004672|GO:0006468
Prci10g0090 622 CDD STKc_MAP3K-like 350 593 - -
Prci10g0090 622 SMART serkin_6 344 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0090 622 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 161 599 - -
Prci10g0090 622 MobiDBLite consensus disorder prediction 599 614 - -
Prci10g0090 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Prci10g0090 622 ProSitePatterns Protein kinases ATP-binding region signature. 350 371 IPR017441 GO:0005524
Prci10g0090 622 ProSiteProfiles Protein kinase domain profile. 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0090 Prci-Chr10 587589 597147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0090 1 622 MAP Kinase Kinase Kinase AT4G35780 65.440 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci10g0090 PK_Tyr_Ser-Thr 1.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0090 - - pcin:129322181 1265.75