Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0089 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTACAGTCACCGCAAGCTCATCCTCGTCAACACAGGAAGAAATTGGAGGTGTACAATGAGGTGCTTCGTCGAACTCAAGAGTCAAATTATGAGGAGGCCAATGTTCCAGGGTTTGATGACCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGACGTGAATGTGGAGAGGGCGGAAGATGTCCTTAGTCACAAGAGATTGCTGAAGTTGGCAGAGGACCCCGCTAAGCGTCCTGTATTTCAAGTTCGATCAGTGCAGGTATATCCTTATGGATGTGCTTATTTTGCTGACTCAACACATTCTGATCCTTCTGAGAAAGAAGATGCGCAGAGTTCTTTTAACTATTCTTTTAAGCAGGGAGTTCATCCACCACCTACTTTTGGTTCATCTTCTAATCTTGAAGCTCTCTCCCGCCAAGCATGTAAGAATAAGGCTGAAGACAGGGACGAAGATATGGATTTGACACCATGCTTTTACAAGCCCATGCACGAGATTACCTTTTCAACTGTTGACAAGCCCAAAGTCCTTAGTCAGTTAACTTCATTACTTGGGGAAATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACCAAAGATGGGTTTTCTCTTGATGTCTTTGTTGTCGTGGGGTGGCCAAACGAGGAAACTGAGGAGCTTAAACGTGTATTGGAAAAGGAGATTTTGAAGTTTAAGAGGGAGCAACATCTATCGAAGCAGGGCGTGCCTTCTGCTGCCATTGAACATTATCATGAGGCAAGGATGGAACCCTTCCCTCATTGTGTAGAAATACCATCTGATGGAACTGATGTCTGGGAAATTGATACCAACCAGCTGAAGTTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGTAATTATTGCAGCCAAGATGTAGCTATCAAAGTCCTTAAGACTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTACATCATGAGGAAAATTCGACACAAGAATGTTGTGCAGTTCATTGGAGCATGCACTCAGCCACCAAATCTATGTATTGTCACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAACAAAGGGGTGTATTTAAGCTTCCTTCTTTACTTAAGGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTGAAGGTTGCTGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACTTACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTAACAGGAGAACTGCCTTATGCTTACCTGTCCCCATTACAAGCGGCAGTAGGCGTGGTGCAGAAGGGTCTACGACCTTCAATCCCCAAGAATGCACACCCAAGGCTATCTGAACTGCTCCGGCGATGTTGGCAGCAAGATCCAATTGAGAGACCGAATTTCTCAGAAATATTGGAAATTCTTCAGCAGATAGCGAAGGAGGATGCAGACGATCGACCCAAGGATAAATCATCTCATGGTTTTCTCTCGGCACTAAGACGGGCCCATCAGTAA 1731 0.4437 MAIEEDLESCGSRACVQSPQAHPRQHRKKLEVYNEVLRRTQESNYEEANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPAKRPVFQVRSVQVYPYGCAYFADSTHSDPSEKEDAQSSFNYSFKQGVHPPPTFGSSSNLEALSRQACKNKAEDRDEDMDLTPCFYKPMHEITFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTKDGFSLDVFVVVGWPNEETEELKRVLEKEILKFKREQHLSKQGVPSAAIEHYHEARMEPFPHCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGNYCSQDVAIKVLKTDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYAYLSPLQAAVGVVQKGLRPSIPKNAHPRLSELLRRCWQQDPIERPNFSEILEILQQIAKEDADDRPKDKSSHGFLSALRRAHQ 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0089 576 CDD ACT_TyrKc 181 248 - -
Prci10g0089 576 Pfam Protein tyrosine and serine/threonine kinase 298 547 IPR001245 GO:0004672|GO:0006468
Prci10g0089 576 PRINTS Tyrosine kinase catalytic domain signature 409 427 IPR001245 GO:0004672|GO:0006468
Prci10g0089 576 PRINTS Tyrosine kinase catalytic domain signature 474 496 IPR001245 GO:0004672|GO:0006468
Prci10g0089 576 PRINTS Tyrosine kinase catalytic domain signature 455 465 IPR001245 GO:0004672|GO:0006468
Prci10g0089 576 PRINTS Tyrosine kinase catalytic domain signature 372 385 IPR001245 GO:0004672|GO:0006468
Prci10g0089 576 PRINTS Tyrosine kinase catalytic domain signature 518 540 IPR001245 GO:0004672|GO:0006468
Prci10g0089 576 Gene3D Phosphorylase Kinase; domain 1 287 376 - -
Prci10g0089 576 MobiDBLite consensus disorder prediction 553 576 - -
Prci10g0089 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 149 553 - -
Prci10g0089 576 Gene3D Transferase(Phosphotransferase) domain 1 377 570 - -
Prci10g0089 576 ProSiteProfiles ACT domain profile. 183 263 IPR002912 -
Prci10g0089 576 Coils Coil 233 253 - -
Prci10g0089 576 SUPERFAMILY ACT-like 181 247 IPR045865 -
Prci10g0089 576 FunFam Serine/threonine-protein kinase isoform 1 288 376 - -
Prci10g0089 576 SUPERFAMILY Protein kinase-like (PK-like) 277 547 IPR011009 -
Prci10g0089 576 Pfam ACT domain 183 228 IPR002912 -
Prci10g0089 576 ProSiteProfiles Protein kinase domain profile. 298 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0089 576 ProSitePatterns Protein kinases ATP-binding region signature. 304 325 IPR017441 GO:0005524
Prci10g0089 576 SMART serkin_6 298 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0089 576 MobiDBLite consensus disorder prediction 553 568 - -
Prci10g0089 576 CDD STKc_MAP3K-like 304 547 - -
Prci10g0089 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0089 Prci-Chr10 587589 597147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0089 1 576 MAP Kinase Kinase Kinase AT4G35780 70.639 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Prci10g0089 PK_Tyr_Ser-Thr 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0089 - - pcin:129322181 1149.42