Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0088 ATGCGCTCCATTCCAAAAACTGGAACAGGGAAAAAAATGGGCGTACCGCAGGGATGGTTGAAAATAGTCCGTAGAAAATTCCTGGGCTCATCCAATAGAGATAGCGCGGCAATTTGTTCAAATGAAAACGATAAACCCTTTCTCGGGAATGAAACGTTGGCATTTAAAGACCATAGTTTGCAAGTCTGCACGAAAGAAGATATCGCGGCAATCAAGATTCAAGCTTATTTCAGGAGCCACCTGGCAAGAAGGGCATATCGAGCTCTCAAAAGCGTGGTGAAGCTGCAAGCATTGGCGCGCGGGGTATTCGTGAGGAGACAATCGCGCATAGCGTTGCACTGTATGCATGCACTCGTTCGCTTACAAGTCAGGATTCGTGCAAGGCAGCGTCTTGGATCTCACGGTGACTGA 411 0.4793 MRSIPKTGTGKKMGVPQGWLKIVRRKFLGSSNRDSAAICSNENDKPFLGNETLAFKDHSLQVCTKEDIAAIKIQAYFRSHLARRAYRALKSVVKLQALARGVFVRRQSRIALHCMHALVRLQVRIRARQRLGSHGD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0088 136 Pfam IQ calmodulin-binding motif 69 87 IPR000048 GO:0005515
Prci10g0088 136 Pfam IQ calmodulin-binding motif 90 107 IPR000048 GO:0005515
Prci10g0088 136 SMART iq_5 88 109 IPR000048 GO:0005515
Prci10g0088 136 SMART iq_5 65 87 IPR000048 GO:0005515
Prci10g0088 136 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Prci10g0088 136 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Prci10g0088 136 PANTHER IQ-DOMAIN 5-RELATED 58 130 - -
Prci10g0088 136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 110 IPR027417 -
Prci10g0088 136 Gene3D - 64 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0088 Prci-Chr10 586499 587504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0088 63 134 IQD Protein Family AT3G51380 77.778 2.06e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0088 - - ccaj:109793784 147.902