Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0067 ATGGTCATTTCCGATCACAACAATCCTAACCTAATCAAACCCACAAATTTTCAAGAAATGGGAACCAGAAAGTTGGGGAACAATAGAAGAGCGTTAAGCGTGATAAATCAGAGTCTAGTGGAGGGTCGAGCGTATCCTTGCGTCATTAACAAGAGGGGATTGCCTGATAAGCATGAAATTTGTGAAAAGAAGCAGGCGGATCCAGTGCATCGACCAATCACCAGGAGATTTGCTGCTCAGATTGCTAGCACGCAACAATCTCACGCTGAGGAAAATAAGAAGCCAAATACTTTAATTTCAAATTGGAATCAATTTGGAGATGTTATATTCATAGACGATGAACACAAATCACCATCAGACCAGCCAGTGCCCATGTCATTAGAGTTAACACATGATAAAGTGGATCAGATGGAAGAAGTTGAGATGGAAGATATAACTGAAGAGCCTATTGTGGACATCGATTCTGGTGATGCCAATAATCCTCTTGCAGTTGTAGATTATGTTGAAGAACTTCACGAGTACTACAGGAAAACGGAGAGTATTAGCTGCGTCACACCAAATTATATGGCACAGCAAGATGACATTAATGAAAGGATGAGGGCTGTACTGATTGACTGGCTTATTGAGGTTCACGATAAATTTGACCTCATGCAAGAGACTTTGTTCCTTACCATTAATCTCATAGATAGGTTTTTGGAAAAGCAGAACGTGATGAGAAAGAAACTGCAGCTAGTTGGCTTGGTTGCGATGCTTTTGGCATGCAAGTATGAGGAAGTTTCTGTGCCAGTAGTAGGGGATCTGATCCTCATATCAGACAAAGCTTACACAAGGAAGGAAGTTCTAGAAATGGAGAAGTTGATTCTCAACACATTACAGTTTAACGTGTCAGTGTCAACACCATATGTTTTTATGAAGAGGTTCCTGAAGGCAGCTGAAGCAGACAAGAAACTTGAGCTAGCGGCTTTCTTCTTGATAGAGCTGTCTCTTGTGGAATATGAGATGTTGAAGTTCCCACCATCATTGCTTGCTGCAGCTGCAGTCTATGCGGCTCACTGTACTACTTTTGGCTTTAAACAGTGGAGTAAGACATGTGAATGGCATACCAACTATTCAGAAGATCAGCTATTAGATTGCTCAAGGATGATGGTTGAGTTCCACCAGAAGGCAGGGACAGGGAGGCTTACAGGGGTATATAGGAAGTACTGCTCATCCAAGTTCAACTACATTGCAAAATGTGAACCGGCAAGTTTTCTTTCGGAGAACCAGTCGTAG 1272 0.4198 MVISDHNNPNLIKPTNFQEMGTRKLGNNRRALSVINQSLVEGRAYPCVINKRGLPDKHEICEKKQADPVHRPITRRFAAQIASTQQSHAEENKKPNTLISNWNQFGDVIFIDDEHKSPSDQPVPMSLELTHDKVDQMEEVEMEDITEEPIVDIDSGDANNPLAVVDYVEELHEYYRKTESISCVTPNYMAQQDDINERMRAVLIDWLIEVHDKFDLMQETLFLTINLIDRFLEKQNVMRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLILNTLQFNVSVSTPYVFMKRFLKAAEADKKLELAAFFLIELSLVEYEMLKFPPSLLAAAAVYAAHCTTFGFKQWSKTCEWHTNYSEDQLLDCSRMMVEFHQKAGTGRLTGVYRKYCSSKFNYIAKCEPASFLSENQS 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0067 423 FunFam G2/mitotic-specific cyclin-1 292 410 - -
Prci10g0067 423 Gene3D - 171 411 - -
Prci10g0067 423 SUPERFAMILY Cyclin-like 159 295 IPR036915 -
Prci10g0067 423 SUPERFAMILY Cyclin-like 299 417 IPR036915 -
Prci10g0067 423 Pfam Cyclin, C-terminal domain 299 414 IPR004367 -
Prci10g0067 423 PIRSF Cyclin_A_B_D_E 6 423 IPR046965 GO:0016538|GO:0044772
Prci10g0067 423 SMART cyclin_7 205 289 IPR013763 -
Prci10g0067 423 SMART cyclin_7 302 384 IPR013763 -
Prci10g0067 423 Pfam Cyclin, N-terminal domain 172 295 IPR006671 -
Prci10g0067 423 ProSitePatterns Cyclins signature. 200 231 IPR006671 -
Prci10g0067 423 CDD CYCLIN_AtCycB-like_rpt1 147 293 - -
Prci10g0067 423 Gene3D - 184 296 - -
Prci10g0067 423 SMART Cyclin_C_2 298 415 IPR004367 -
Prci10g0067 423 PANTHER CYCLINS 118 394 IPR039361 -
Prci10g0067 423 FunFam G2/mitotic-specific cyclin 184 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0067 Prci-Chr10 464336 467937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0067 1 418 Core Cell Cycle Gene Families AT1G20610 56.944 1.69e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0067 K21777 - qsa:O6P43_033528 637.106