Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0049 ATGGATTCCGGAGGGACCTGTTTGCCGACCACTCTTCTAGTCTTCCAGAACACCATTAAAGAAGAGCTGATCAGGAGCGTGCATGTCTACCGAATGAGGGATGGGAGGGAGAGCGAGGTTGAAAGAGAGTTTGTATTTTCCCGAAGTGGCTCATACGGGGAAATGCGGGCTTCCCCAATTCTTAGATTACAGAAATTTCGTGTTTCCGAAGTTTCTGAAGGGTATCAGAATGGAGTCTGGCTTTGTGTCTTTGCGTTTCACGCCGATCACAAGCCTCAGTCTTCCTGCGTTCCTCCGTTGTTATCAGTCGCGAGCAATCCCAAGCTTCAGATGATCCCAAGATTGCTTAATGATCTCCATATGATACATGAGTTGAACTGTAAATCAAAAGAGAATGATATGCTGCAAATCTCTCCTGATGAAAGATTCCAAAGAAACAGCAATAACAGCCATCAGCCAAGAAAAATTTTGCTCCAGGATCTCAATCGCCTTCCTTACCCAGATGGCATGTCTGAGTTACAAGACAAGGAAGCAGATGAAGAAAGTTTAGGGATGTCTGAGTTACCAGGGAATGAATCAGATGGTGAAAGTTTAGACCCAGCTGATTTACCAGATAATGACATTATTGACGAAATTTTACAAGGTCGCATAGAGAAGAAAAAGAGGGCAGCAAGTAAAGATGTAGCAAGCATTCTTTTAGCAGATCTGGTGAAGTACTTTGATGTGCCAATTGTAGAAGCATCAAGAAATCTAAAAGTTGGACTTACTGTACTCAAGAGGAAGTGTAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATTAAATCGCTTGACAATCTCATTCATGATCTTCAGGAAGTGGCAGAAAATGAAGAAATAGAGGATGATGTTGCTGTTATGGCAGTGATGAAGAGGCAAAAGATGCTCGAGTGTGAAAAAGAAGTTATTGAGAGGAAACCTTCCATCGACATACAAAGAGAAACCAAGAGATTCAGGCAGGATGTCTTCAAGAGAAGGCACAGAGCTAGAGCTATGACCAAACAGAACTCTAGGTCAAAAAGGTCAAAGAGTTGA 1077 0.4271 MDSGGTCLPTTLLVFQNTIKEELIRSVHVYRMRDGRESEVEREFVFSRSGSYGEMRASPILRLQKFRVSEVSEGYQNGVWLCVFAFHADHKPQSSCVPPLLSVASNPKLQMIPRLLNDLHMIHELNCKSKENDMLQISPDERFQRNSNNSHQPRKILLQDLNRLPYPDGMSELQDKEADEESLGMSELPGNESDGESLDPADLPDNDIIDEILQGRIEKKKRAASKDVASILLADLVKYFDVPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDNLIHDLQEVAENEEIEDDVAVMAVMKRQKMLECEKEVIERKPSIDIQRETKRFRQDVFKRRHRARAMTKQNSRSKRSKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0049 358 MobiDBLite consensus disorder prediction 336 358 - -
Prci10g0049 358 Coils Coil 275 295 - -
Prci10g0049 358 Pfam RWP-RK domain 232 278 IPR003035 -
Prci10g0049 358 PANTHER PROTEIN RKD4 84 351 IPR044607 GO:0003700
Prci10g0049 358 MobiDBLite consensus disorder prediction 168 205 - -
Prci10g0049 358 ProSiteProfiles RWP-RK domain profile. 213 298 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0049 Prci-Chr10 373541 377467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0049 19 351 AtRKD Transcription Factor Family AT4G35590 46.726 7.96e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Prci10g0049 RWP-RK 8.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0049 - - pcin:129284388 713.375