Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0039 ATGAGAGGCTTATTGCGCATTTTTGAGTTCAATCACGGGAGCATGGCCAAGAAAGTTCATGCCCACAAGAGACATCATGGTGGCCTGGAACCTCCTCGCAATAGCCTGGAGCTTCAAGCTGAAGCATCTCAAATTCATTGCGCGCAAGGAGAATTACCGTATCATTATCAAGTAGAAAACTTGTCAGAGAATACTTGTCCTTCAGATGCAGTTTCAGTGAAGAAACTTATCAATGATGAGCTATGCCAACGACCAACCACCAAATCGAATGCACCGAGCCTTGTGGCAAGATTGATGGGTATAGATATGATGCCATCGGATGCTAAATCTGCAGTTCCATCAGATGAAATAAAAAGTGGAAGCATGGAGAAGAAGTTTTTAGAGGAGAAAGTGAATGGAAGGGGTTCGGGTGGTTGGGGTTCTAGCAACTCAAATTCTTGTAGTCACATGGAATTTGACTCTTATTACCAAGACGTAGATGATGATGATGGATGGAACCAACATTTGGGAAAGCCAAAGCCCCGGGAACATCCTCAGGAAGAGGAACTACAGAAGTTCAAGAAAGAATTTGAGGCATTTCAAGCGGCAAGGTTAATGGAGTGTTCAAAGGTTGTTGAAGTTGGCAATACCCCCAAACCATTGCTCACACGAGAGGGCATGAACAAGAAAAAGATGGCAGATCGTGCAACTTCACAATGGCTGGCAACAGAGTTACCAAATAATGGAGGTCCAGAATATCATGGTAATACCATGGAGTTATTTCCTACCAAGCGCAAAGAAACCTTTCCTTCAAGGAGCAGAACCTTAAGCAGAGACTTTGAGGAATCCTTAATGATGAAATCGAACGGTCAAATGGATAGTTCTTCACCAACTCGAATAGTAATCTTGAAGCCCGGTCCTGATAGGATTTACAGCCAAGAGGATAATTGGACCAATCCATCCAGCAATATACGAGGGAGAAATAGCATACAAGATTTTCTTGAAGAGGTCAGAGAGCGGCTAAAATGTGAACTGGAGGGGAAAACTTTTAAAAAGGGTTATGTGGTTCGAGGAAGTGGGATTGAGACACCTTACAATGAAAAGCCATCAGATCCTAAACAAATTGCACGTAATATAGCAAAGCAGGTCAGAGAAAGTGTGACTAGAGATGTTGCAAGAAATTTGCTCCGCTCAGAATCAACAAGATCACACAGAAGTGAAATTCAGTTCAATGGATCAAGTTCCCCAGAATTTATCAAGAGAGATACCAGGAGATTCTTGTCAGAGAGGCTGAGAAATGTTCTAAAAAGCAAAGATTATCTTGATATTCCTGAAGTGACTCGTGGGAATTCAAGGTCATATCTCTTAGATAATCACAATGACAGGTTAAAACAGGATGATGATGTTATGAATTCAAATGATTTGAACCACTGGGAAATTTCTAAAGCGGAAAAAGAAATGCAAACAGGCTCTTTCAGGCGTGAACATGTTGATAATATATCGCTCCCCAAAGAATTGTCCCCTAGAAACCTTGTTAGATCCTTGTCTGCTCCTGTATCAGGAACGTCATTTGGAAAGCTTCTTCTAGAGGACCGCCATATTTTAACTGGTGCCCAAATTCGGAGGAAGCTTGAAGCTATTGAAACTGTGTCTGTTGATGTTGAAAAGAAAAAGAAGGATAGATTTAACATTAAAGAAAAGGTTTCCAGCTTTAAATATAATCTTGTCCTAAGAGGGAAGCTGTTTGGAAAAAAGTTTCAATCAATGGTGGAATCACATAGCAATGAAGATGGTCCCATGATGGTCGATGTCACAAGCAGACCAACAGTTCTTTTGAATTGGGGTGAGAGGCATGAGAACTCCACTGAGGTACCTCCCAGTCCTGCATCTGTATGCAGCAATGGTCAGGAAGAGCTATGGAAGCGAGCTGAATACTTAAGTCCAATATCAACTCCAGATGTATCTTCAGGAGATGATAATGCTGTGCCAGAGGCTTTTAGAGAAATTAGTTCTGGTTTGAATGAGTTAAGGAGGCAGATAACTCAACTTGAGTCTGATGGCCCCATGGAATTAATGGTCAAACAGGAGCCTAAAGAATCTGAGTTGGTGCAATTAGAGGATCCAGCTGAATCTTACATAAGAGATCTGCTTGTTGCCTCTGGTCTATACTTCGGTTCAGGGGATAAATCCTTATTAAAAGGGGACACATTTGCAAAGCCTATTGGGAACTCAGTTTTTGAAGAAGTGGAGGAATCTCTCAAAAAAATGTTCAAGGAGAATGAAACTTCTACCAAGGATCAAAGTGACAATAAGTTAGAGCACAAACTATTGCATGCTTTGCTAAATGAAGCACTTTTCATTGTTCTTGGACCACCTTTAACGTTGTCTAGATTCAGAAGGAAACTATGCAGTTCTTCCTCCATACTGCCGTCACCACGTGGGAAGGAACTTTTGAAGTTAGTATGGGAAATCATCAGAGTTTCTTTATATCCACCGTCTGACATAACTTCTGATTCACTTGATACGTTGGTGGCCAGAGAGCTGGGATCCAACCCCTGGGTTGGATTGTCAGATGACGAGGTTAATATACTGGAAAGAGAGATAGAACGTCTACTTACTGAAGATCTGGTTGAAGAACTCACAAGAGATATGATATGCTCGTAG 2643 0.4147 MRGLLRIFEFNHGSMAKKVHAHKRHHGGLEPPRNSLELQAEASQIHCAQGELPYHYQVENLSENTCPSDAVSVKKLINDELCQRPTTKSNAPSLVARLMGIDMMPSDAKSAVPSDEIKSGSMEKKFLEEKVNGRGSGGWGSSNSNSCSHMEFDSYYQDVDDDDGWNQHLGKPKPREHPQEEELQKFKKEFEAFQAARLMECSKVVEVGNTPKPLLTREGMNKKKMADRATSQWLATELPNNGGPEYHGNTMELFPTKRKETFPSRSRTLSRDFEESLMMKSNGQMDSSSPTRIVILKPGPDRIYSQEDNWTNPSSNIRGRNSIQDFLEEVRERLKCELEGKTFKKGYVVRGSGIETPYNEKPSDPKQIARNIAKQVRESVTRDVARNLLRSESTRSHRSEIQFNGSSSPEFIKRDTRRFLSERLRNVLKSKDYLDIPEVTRGNSRSYLLDNHNDRLKQDDDVMNSNDLNHWEISKAEKEMQTGSFRREHVDNISLPKELSPRNLVRSLSAPVSGTSFGKLLLEDRHILTGAQIRRKLEAIETVSVDVEKKKKDRFNIKEKVSSFKYNLVLRGKLFGKKFQSMVESHSNEDGPMMVDVTSRPTVLLNWGERHENSTEVPPSPASVCSNGQEELWKRAEYLSPISTPDVSSGDDNAVPEAFREISSGLNELRRQITQLESDGPMELMVKQEPKESELVQLEDPAESYIRDLLVASGLYFGSGDKSLLKGDTFAKPIGNSVFEEVEESLKKMFKENETSTKDQSDNKLEHKLLHALLNEALFIVLGPPLTLSRFRRKLCSSSSILPSPRGKELLKLVWEIIRVSLYPPSDITSDSLDTLVARELGSNPWVGLSDDEVNILEREIERLLTEDLVEELTRDMICS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0039 880 Coils Coil 659 679 - -
Prci10g0039 880 MobiDBLite consensus disorder prediction 161 181 - -
Prci10g0039 880 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Prci10g0039 880 Pfam Domain of unknown function (DUF4378) 704 872 IPR025486 -
Prci10g0039 880 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 878 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0039 Prci-Chr10 318529 324008 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0039 73 879 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.647 2.16e-156 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0039 - - gmx:100789616 1110.52