Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0031 ATGGCGGAAGTTTGGTTTCCGGCGCTGATGATCCTCTTCCTTGGATTCTCTTCGACCGTGGCATGCTCGAATCATTCCCCAAGACCCGATTCTGTAAATATTGGGGTTCTCCACTCTTTCAACACCACCGTCGGTCGAATTGTAAAGATTGCAATAGAGGCTGCAGTTGAAGATATAAATTCTGTTCCATCTATTCTCGGTAAAACTAAGCTCAAAGTCTCAATGCAAGAGGATTCCAAGTACAGAGGTTTTCTGAGCATTGCGGAGGCCCTGCATCTCACTGCGAAACACGCGGTGGCTATAATTGGCCCGCAAAGCTCCATCACAGGTCATGTGATATCTCACATTGCAAACGAGCTCCAAGTTCCCCTGCTATCAGTTTCTGCAACGGACCCCACTCTCTCTTCCCTTCAATTCCCATTCTTTGTCAGAACTACTCACAGCGATCTTTATCAGATGACTGCAATAGCAGAGCTTGTTGACTACTACGGGTGGAGGGAGGTCATTGCAATCTATGTGGACGATGATCACGGAAGAAACGGGATCAGTGCATTAGGAGATAAGCTCGCGGAGAGACGGTGCAGGATCTCTTATAAAGCTCCGATGAGCCCCGAAGCAACAAGGGAGGAGATCACGAACGTGCTTGTTCAGGTGGCTCTGGCAGAGTCCAGGATCATAATTCTACACGCCAGTTCTGCCTGGGGCCCCAAGGTGTTCAGAGTGGCCAAGTATCTGGAAATGATGGGATCCGGCTATGTTTGGATAGCCACTCATTTCCTCTCCACTCTTCTGGATACAAACGGTCCGCTCCCTCACGATACCATGGACATGATTCAAGGGGTTCTTACGCTGCGTATGTACACCCCCGATTCAGAGCTCAAACGAAGATTCGTTTCTCGGTGGAAAAACTTGACTCGCGCCACTACCACTGTTCACCACCTTGGATTGAGTACGTTTGGCCTCTTTGCATATGATACTGTTTACGCGCTTGCTCGCGCGCTTGACAGTTTTTTCAAACAAGGGAATCGAATCACATTCTCGTACGATCCCAAATTGTCTGAGCTGCGCCGCGACAACTTGAATCTGGAATCCGTGAGCATCTTCGATCAAGGAAACGTGTTGAGGGAAAGTATCTACGAGGTTGAAATGACTGGGGTAACGGGTTCCTTCAAGTATGCATCCGATGGAAACCTGGTCAATCCAGCATATGAAATCCTCAACGTGATAGGGACGGGATCTAGGAAGATCGGTTATTGGAGTAACTACACTGGATTATCTGTTGTTGCTCCGGAAGTACTCTATGCACGCCCGCCAAATCGTTCGGCGGCGAGCCAGAAGCTGCGACCGGTGATTTGGCCTGGGGACACAGAGCAGAAGCCTCGTGGTTGGGTTTTTCCGAGCAGTGGGAGGCTCTTAAAAATTGGAGTGCCGGTAGGATTTAGTTACCGTCAGTTTGTCTCGCAAGTACAGGGCACTGACATGTTCAAGGGCTTCTGCATTGATGTGTTTCTTTCTGCACTGAACTTGCTGCCTTATGGCGTCCCTTATAGGCTCGTTCCATTTGGGGATGGTCGCAGCAATCCTGATAACAACGAGCTCGTTCGTTTGATCACGGCGGGTGTCTTTGACGGAGCAGTTGGTGACATTACAATCACTACGGAGCGAACAAAGATGGTAGATTTCACTCAGCCATTTATTGGGTCCGGCCTGGTAGTTGTAGCCCCAGTTAGGAAGTCAGACTCGAGTGCCTGGGCCTTTTTGAGACCCTTTAGTCCGGAGATGTGGGGTGTCACGGCCATCGTTTTCCTGGCTGTTGGGGCTGTTGTTTGGATTTTGGAGCATAGATTGAATGATGAATTCCGGGGACCTCCCAGAAGACAATTAACTACGGTTTTGTGGTTCAGTTTTTCAACCATGTTTTTCGCCCACAGGGAAAACACAGTGAGCACTCTTGGTCGAATTGTGCTTCTTATATGGTTGTTCGTGGTTCTCATAATAAAATCTAGTTACACGGCAAGCCTGACCTCAATCCTCACCGTGCAGCAGCTTTCTTCTCCCATTAAAGGCATTGAGACCTTAGTTGCTAGCAAAGAGCCTGTTGGCTACCTGGAGGGTTCTTTCAGTAGGAACTATCTAATTGAAGAAACTGGAATTGATGAATCCAGACTTGTTCCTCTGAGGACACCAGAAGAGTCTGCCAGAGCATTGAGAGACGGTCCCAAAAAGGGCGGCGTTGCCGCCTACGTTGATGAGCGTGCTTACATTGAACTCTTCCTTTCAAGCCGATGCGAGTTCTCCATAGTTGGCCGAGAGTTTACCAGAAATGGTTGGGGATTTGCTTTTCCAAGAGACTCGCCTCTGGCGGTTGACATGTCGAGTGCAATATTGAAATTGGCAGAGAATGGAGAACTGCGGAGGATTCATGACAAGTGGTTGCTGAATATCGCGTGCCTATCACAAAACACCAAGTTTGAAGTGGACAGACTTCGTCTTAAAAGCTTTTGGGGGCTGTATCTGGCGTGCGGGGTGGCGTGCGGGGTGGCTTTATTCATATATCTCATACGGATGATGAGGCAGTACAAGAAGCACTACGTAGCGGAGGTGGATTCCGGCACTGGATCTTCTTCCAGCATTCGTACTTTCCTTACATTTGCAGCCCAGAAAGAATCTGAAGTGAAAAGCCGATCCAAGACCAAGAGAAGGCTCTCTCGCGGAAGCACAAGTGCTGGCGGATTAGTCATCAACTCCATCGGACAATGCTCTCTCTCATCTTCCGCTCAGGCCTGA 2787 0.4901 MAEVWFPALMILFLGFSSTVACSNHSPRPDSVNIGVLHSFNTTVGRIVKIAIEAAVEDINSVPSILGKTKLKVSMQEDSKYRGFLSIAEALHLTAKHAVAIIGPQSSITGHVISHIANELQVPLLSVSATDPTLSSLQFPFFVRTTHSDLYQMTAIAELVDYYGWREVIAIYVDDDHGRNGISALGDKLAERRCRISYKAPMSPEATREEITNVLVQVALAESRIIILHASSAWGPKVFRVAKYLEMMGSGYVWIATHFLSTLLDTNGPLPHDTMDMIQGVLTLRMYTPDSELKRRFVSRWKNLTRATTTVHHLGLSTFGLFAYDTVYALARALDSFFKQGNRITFSYDPKLSELRRDNLNLESVSIFDQGNVLRESIYEVEMTGVTGSFKYASDGNLVNPAYEILNVIGTGSRKIGYWSNYTGLSVVAPEVLYARPPNRSAASQKLRPVIWPGDTEQKPRGWVFPSSGRLLKIGVPVGFSYRQFVSQVQGTDMFKGFCIDVFLSALNLLPYGVPYRLVPFGDGRSNPDNNELVRLITAGVFDGAVGDITITTERTKMVDFTQPFIGSGLVVVAPVRKSDSSAWAFLRPFSPEMWGVTAIVFLAVGAVVWILEHRLNDEFRGPPRRQLTTVLWFSFSTMFFAHRENTVSTLGRIVLLIWLFVVLIIKSSYTASLTSILTVQQLSSPIKGIETLVASKEPVGYLEGSFSRNYLIEETGIDESRLVPLRTPEESARALRDGPKKGGVAAYVDERAYIELFLSSRCEFSIVGREFTRNGWGFAFPRDSPLAVDMSSAILKLAENGELRRIHDKWLLNIACLSQNTKFEVDRLRLKSFWGLYLACGVACGVALFIYLIRMMRQYKKHYVAEVDSGTGSSSSIRTFLTFAAQKESEVKSRSKTKRRLSRGSTSAGGLVINSIGQCSLSSSAQA 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0031 928 Gene3D - 782 812 - -
Prci10g0031 928 Gene3D - 50 400 - -
Prci10g0031 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 888 IPR015683 -
Prci10g0031 928 FunFam Glutamate receptor 467 583 - -
Prci10g0031 928 Gene3D - 148 425 - -
Prci10g0031 928 Pfam Receptor family ligand binding region 49 410 IPR001828 -
Prci10g0031 928 Pfam Bacterial extracellular solute-binding proteins, family 3 529 812 IPR001638 -
Prci10g0031 928 FunFam Glutamate receptor 583 713 - -
Prci10g0031 928 Gene3D - 741 781 - -
Prci10g0031 928 Pfam Ligand-gated ion channel 813 845 IPR001320 GO:0015276|GO:0016020
Prci10g0031 928 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci10g0031 928 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci10g0031 928 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci10g0031 928 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Prci10g0031 928 FunFam Glutamate receptor 148 307 - -
Prci10g0031 928 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Prci10g0031 928 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Prci10g0031 928 FunFam Glutamate receptor 709 816 - -
Prci10g0031 928 SUPERFAMILY Periplasmic binding protein-like II 450 813 - -
Prci10g0031 928 Gene3D - 583 707 - -
Prci10g0031 928 CDD GluR_Plant 472 812 - -
Prci10g0031 928 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Prci10g0031 928 Gene3D - 472 582 - -
Prci10g0031 928 PIRSF IGluLR_plant 1 911 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0031 Prci-Chr10 240257 244224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0031 5 902 Ion Channels AT3G51480 58.758 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0031 K05387 - gmx:100788917 1342.79