Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0030 ATGGAGACTTCAAGGGCTTGGCTCTGCCTGCTGGCCGCTCTCCTCTGTTTCCTCCAGCGATCACCAATTTACGGTTCATATCAAGCTCCTGTCAACAAGGATAATGATAAAGAAAATGCATCTGGACCAAGCAATGAGTTCATAGATGTCGGAGATGACTGGAGCTTATATCAAAGAAAGCCCTTTGGTAAAATGGTATGGAGACTCTTAACATCTATTGAAGATATTGTTAAAGCTACACCTAAATTATCAAATGATGGAGTTCTTACACTTGGATCTAAAAGAATTACTGTTTTTGAAGTTGATGCTAAAACTGGAAGGATCTTTCGAAGTTACACTGCATCTGATTTTGATAATGCCTTTGCACTGTGGAGTGATGACAGGCAAAGTGTTCAAAATATTCTTACTACTGAAAATGAGGAGTTAGTAAAGTCTGATCCTCTTAAGCTTCATATGCCGGAGCCGCTACTCATGTTATTTAGGACAGATTATTCTCTACAAGCTGTTAGTCCTGGATCAGAAAAAGTTGCATGGAGTATGACTGTAGCTGAATTTGAGGCTGTCTTATATTGCCAACATAATGAAAATCCAATGGACGGGGCATTATTTGATTCAGAGGGTAAGTATGCTTGTGACAGTGGCCTGGATTTTGCTTTGCCATACCCATGTTGGGTGAAGCAAAAGGTCTACCGCCTGCCAAAAAGCTTTCCAGTACAACCTTCAATTGTTGAGAGATTCCCTGAGGCTACTTGTGATAATGAAATGCTCCCAATGCCCCATGCAGATCTGATGCTTCCTGTGCAGCCTAATAATCATAGATTTTTAAATGGCGATGATAATATTATGATGCTTCCCATGCCTGTGCCAGATTTGTTGCCTCCTCTGCTTCCACAAAGGGGCAACAGTGATGACACATTTGAGCTTCCTCCGCATCTGACACAGATTGCAACACGTGAGGAAGTTAATCTGAAGGGGGAGATTTCATGGTTAAAATATTTGCTTCTGGTACTGTTCATGGTCTCCATCTTGGTGTTGATTTTTCCCTCTTTGAAGTTAATCTGGCACTGTTCATTTCAAAAGCTATTGAAAAAAGGCCAAAATAGTGAGTTTGATTTAAAAAGTACCCTTAAGAGAAAGAAAACACGCAAGTCAGGAAAGAGCAGTGGAATTGTTGACAAGAAGGTTAAGCCATTGGTATCAGAAGATGACAAATCAATGCCACACTGTAGAGATGATAAGGAACCTCTGCTATATGTTGATAAAGCTGATGAATGTGCTGATGGGCGCAAGATTGGTAAATTATTTGTGTCAAATAAAGAAATTGCCAAGGGAAGCAATGGAACCATTGTTCTAGAGGGAACATATGAGTGTCGAGTGGTTGCTGTAAAGCGTCTTGTCCAGGCTCATCATGATGAGGCCTTTAAAGAAATTCAAAATCTTATTGCATCTGACTATCACCCAAACATTGTTCGATGGTTTGGGGTGGAAAATGATCAAGATTTTGTCTACCTTGCTCTAGAGCGTTGTTCATGTAACTTAGATGATTTAATTCAGCTTCACTCAGATATAGCAGAAAACTCAGTGTTGAGCAAGAACGAAACTTTAAAGGCTCAATTGGAGATAGGAAAGAAAAATATGCAGAACCTTTGGAAAGCAAATGGCTTCCCATCACCTCTCCTATTGAAGCTAATGAGAGATATAGTTTCGGGGCTTTGTCATTTGCATGAACTGGGAATGGTGCATCGGGATTTGAAACCCCAAAATATTTTGATAATCAATGAAAGATCTTTATGTGCAAAGCTTTCTGATATGGGCATTAGTAAACGACTTCTGGAAGATATGTCATCTTTTGGTCATAATGGTACTGGCTGCGGTAGTTCAGGCTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGAGCTGTTGATTTATTTAGTCTAGGTTGCGTCTTATTTTTTTGTATAACTGGAGGAAGACATCCATTTGGAGAACGTCTTGAACGTGATTTTAATATTGTGAGAAATCAAAAGGATCTTTTCTTAGTGGATTACATTCCTGAAGCAGAGGATCTTATTTCTTGTTTATTAAACCCTGAGCCTGATCTAAGGCCCAAGGCAGTTGAAGTATTGCACCATCCTTTCTTTTGGGATTCTGAAATGAGACTTTCCTTTCTCCGAGATGCCAGTGATAGAGTGGAATTGGAAGATAGGGAGACTAATTCTGATCTTTTGAAGGCGTTGGAAGGTAGTGCACCAGCGGCTTTAAATGGGAACTGGGATGAAAAAATGGAACCAACCTTCATTGCTAACATTGGTCGTTACCGGCGATACAAATATGACAGTGTTCGAGACTTATTACGAGTCATGAGAAACAAGCTGAATCACTATAGAGAATTGCCTCAAGAAATTCAGGAACTTGTGGGACCGATTCCAGAAGGATTCAATGACTACTTTGCAAGTCGGTTTCCTAGACTCCTAATTGAAGTGTATAAAGTCATGTGCAAATATTGCAAGGCTGAGGAATGTTTCCAGCGGTACTTTAAAAACGTTTAA 2559 0.4005 METSRAWLCLLAALLCFLQRSPIYGSYQAPVNKDNDKENASGPSNEFIDVGDDWSLYQRKPFGKMVWRLLTSIEDIVKATPKLSNDGVLTLGSKRITVFEVDAKTGRIFRSYTASDFDNAFALWSDDRQSVQNILTTENEELVKSDPLKLHMPEPLLMLFRTDYSLQAVSPGSEKVAWSMTVAEFEAVLYCQHNENPMDGALFDSEGKYACDSGLDFALPYPCWVKQKVYRLPKSFPVQPSIVERFPEATCDNEMLPMPHADLMLPVQPNNHRFLNGDDNIMMLPMPVPDLLPPLLPQRGNSDDTFELPPHLTQIATREEVNLKGEISWLKYLLLVLFMVSILVLIFPSLKLIWHCSFQKLLKKGQNSEFDLKSTLKRKKTRKSGKSSGIVDKKVKPLVSEDDKSMPHCRDDKEPLLYVDKADECADGRKIGKLFVSNKEIAKGSNGTIVLEGTYECRVVAVKRLVQAHHDEAFKEIQNLIASDYHPNIVRWFGVENDQDFVYLALERCSCNLDDLIQLHSDIAENSVLSKNETLKAQLEIGKKNMQNLWKANGFPSPLLLKLMRDIVSGLCHLHELGMVHRDLKPQNILIINERSLCAKLSDMGISKRLLEDMSSFGHNGTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCITGGRHPFGERLERDFNIVRNQKDLFLVDYIPEAEDLISCLLNPEPDLRPKAVEVLHHPFFWDSEMRLSFLRDASDRVELEDRETNSDLLKALEGSAPAALNGNWDEKMEPTFIANIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGPIPEGFNDYFASRFPRLLIEVYKVMCKYCKAEECFQRYFKNV 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0030 852 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 542 719 - -
Prci10g0030 852 Gene3D KEN domain 720 852 IPR038357 -
Prci10g0030 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Prci10g0030 852 SUPERFAMILY Protein kinase-like (PK-like) 431 726 IPR011009 -
Prci10g0030 852 Gene3D Transferase(Phosphotransferase) domain 1 536 719 - -
Prci10g0030 852 PANTHER IRE1-RELATED 66 851 IPR045133 GO:0004521|GO:0004674|GO:0030968
Prci10g0030 852 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 721 852 - -
Prci10g0030 852 SMART PGNneu 782 836 - -
Prci10g0030 852 Pfam Protein kinase domain 437 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0030 852 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 427 507 - -
Prci10g0030 852 ProSiteProfiles KEN domain profile. 720 851 IPR010513 GO:0004540|GO:0006397
Prci10g0030 852 SMART serkin_6 435 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0030 852 ProSiteProfiles Protein kinase domain profile. 435 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0030 852 CDD RNase_Ire1 721 849 - -
Prci10g0030 852 Gene3D Phosphorylase Kinase; domain 1 421 507 - -
Prci10g0030 852 Pfam Ribonuclease 2-5A 723 849 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0030 Prci-Chr10 228490 238586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0030 461 716 MAP Kinase Kinase Kinase AT3G06030 28.846 4.77e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Prci10g0030 Pkinase 2.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0030 K08852 - gmx:100788389 984.171