Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0029 ATGAAATTTCAATTTCTTTGCACATCACGTGTTCTGATCATATTGCTAATTGTCTTTTGCTCGAGCTTAAACGGTGACATCTCGGTATCAAAGTCAGAGAGCTCTCAAGTCTCTCTTGTTGGTAATCGTGATGGAGACTTCAAGGGCTTGGCTCTGCCTGCTGGCCGCTCTCCTCTGTTTCCTCCAGCTAAGCCTAGTACGGCACTAATTGTTGCCCCAGATCAAAATGGGACTATACATTTGGTGGAGAGTGGTTCCATGAGGATAATATGGTCATTTCCAACAGGATCACCAATTTACGGTTCATATCAAGCTCCTGTCAACAAGGATAATGATAAAGAAAATGCATCTGGACCAAGCAATGAGTTCATAGATGTCGGAGATGACTGGAGCTTATATCAAAGAAAGCCCTTTGGTAAAATGAGACTCTTAACATCTATTGAAGATATTGTTAAAGCTACACCTAAATTATCAAATGATGGAGTTCTTACACTTGGATCTAAAAGAATTACTGTTTTTGAAGTTGATGCTAAAACTGGAAGGATCTTTCGAAGTTACACTGCATCTGATTTTGATAATGCCTTTGCACTGTGGAGTGATGACAGGCAAAGTGTTCAAAATATTCTTACTACTGAAAATGAGGAGTTAGTAAAGTCTGATCCTCTTAAGCTTCATATGCCGGAGCCGCTACTCATGTTATTTAGGACAGATTATTCTCTACAAGCTGTTAGTCCTGGATCAGAAAAAGTTGCATGGAGTATGACTGTAGCTGAATTTGAGGCTGTCTTATATTGCCAACATAATGAAAATCCAATGGACGGGGCATTATTTGATTCAGAGGGTAAGTATGCTTGTGACAGTGGCCTGGATTTTGCTTTGCCATACCCATGTTGGGTGAAGCAAAAGGTCTACCGCCTGCCAAAAAGCTTTCCAGTACAACCTTCAATTGTTGAGAGATTCCCTGAGGCTACTTGTGATAATGAAATGCTCCCAATGCCCCATGCAGATCTGATGCTTCCTGTGCAGCCTAATAATCATAGATTTTTAAATGGCGATGATAATATTATGATGCTTCCCATGCCTGTGCCAGATTTGTTGCCTCCTCTGCTTCCACAAAGGGGCAACAGTGATGACACATTTGAGCTTCCTCCGCATCTGACACAGATTGCAACACGTGAGGAAGTTAATCTGAAGGGGGAGATTTCATGGTTAAAATATTTGCTTCTGGTACTGTTCATGGTCTCCATCTTGGTGTTGATTTTTCCCTCTTTGAAGTTAATCTGGCACTGTTCATTTCAAAAGCTATTGAAAAAAGGCCAAAATAGTGAGTTTGATTTAAAAAGTACCCTTAAGAGAAAGAAAACACGCAAGTCAGGAAAGAGCAGTGGAATTGTTGACAAGAAGGTTAAGCCATTGGTATCAGAAGATGACAAATCAATGCCACACTGTAGAGATGATAAGGAACCTCTGCTATATGTTGATAAAGCTGATGAATGTGCTGATGGGCGCAAGATTGGTAAATTATTTGTGTCAAATAAAGAAATTGCCAAGGGAAGCAATGGAACCATTGTTCTAGAGGGAACATATGAGTGTCGAGTGGTTGCTGTAAAGCGTCTTGTCCAGGCTCATCATGATGAGGCCTTTAAAGAAATTCAAAATCTTATTGCATCTGACTATCACCCAAACATTGTTCGATGGTTTGGGGTGGAAAATGATCAAGATTTTGTCTACCTTGCTCTAGAGCGTTGTTCATGTAACTTAGATGATTTAATTCAGCTTCACTCAGATATAGCAGAAAACTCAGTGTTGAGCAAGAACGAAACTTTAAAGGCTCAATTGGAGATAGGAAAGAAAAATATGCAGAACCTTTGGAAAGCAAATGGCTTCCCATCACCTCTCCTATTGAAGCTAATGAGAGATATAGTTTCGGGGCTTTGTCATTTGCATGAACTGGGAATGGTGCATCGGGATTTGAAACCCCAAAATATTTTGATAATCAATGAAAGATCTTTATGTGCAAAGCTTTCTGATATGGGCATTAGTAAACGACTTCTGGAAGATATGTCATCTTTTGGTCATAATGGTACTGGCTGCGGTAGTTCAGGCTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGAGCTGTTGATTTATTTAGTCTAGGTTGCGTCTTATTTTTTTGTATAACTGGAGGAAGACATCCATTTGGAGAACGTCTTGAACGTGATTTTAATATTGTGAGAAATCAAAAGGATCTTTTCTTAGTGGATTACATTCCTGAAGCAGAGGATCTTATTTCTTGTTTATTAAACCCTGAGCCTGATCTAAGGCCCAAGGCAGTTGAAGTATTGCACCATCCTTTCTTTTGGGATTCTGAAATGAGACTTTCCTTTCTCCGAGATGCCAGTGATAGAGTGGAATTGGAAGATAGGGAGACTAATTCTGATCTTTTGAAGGCGTTGGAAGGTAGTGCACCAGCGGCTTTAAATGGGAACTGGGATGAAAAAATGGAACCAACCTTCATTGCTAACATTGGTCGTTACCGGCGATACAAATATGACAGTGTTCGAGACTTATTACGAGTCATGAGAAACAAGCTGAATCACTATAGAGAATTGCCTCAAGAAATTCAGGAACTTGTGGGACCGATTCCAGAAGGATTCAATGACTACTTTGCAAGTCGGTTTCCTAGACTCCTAATTGAAGTGTATAAAGTCATGTGCAAATATTGCAAGGCTGAGGAATGTTTCCAGCGGTACTTTAAAAACGTTTAA 2781 0.4009 MKFQFLCTSRVLIILLIVFCSSLNGDISVSKSESSQVSLVGNRDGDFKGLALPAGRSPLFPPAKPSTALIVAPDQNGTIHLVESGSMRIIWSFPTGSPIYGSYQAPVNKDNDKENASGPSNEFIDVGDDWSLYQRKPFGKMRLLTSIEDIVKATPKLSNDGVLTLGSKRITVFEVDAKTGRIFRSYTASDFDNAFALWSDDRQSVQNILTTENEELVKSDPLKLHMPEPLLMLFRTDYSLQAVSPGSEKVAWSMTVAEFEAVLYCQHNENPMDGALFDSEGKYACDSGLDFALPYPCWVKQKVYRLPKSFPVQPSIVERFPEATCDNEMLPMPHADLMLPVQPNNHRFLNGDDNIMMLPMPVPDLLPPLLPQRGNSDDTFELPPHLTQIATREEVNLKGEISWLKYLLLVLFMVSILVLIFPSLKLIWHCSFQKLLKKGQNSEFDLKSTLKRKKTRKSGKSSGIVDKKVKPLVSEDDKSMPHCRDDKEPLLYVDKADECADGRKIGKLFVSNKEIAKGSNGTIVLEGTYECRVVAVKRLVQAHHDEAFKEIQNLIASDYHPNIVRWFGVENDQDFVYLALERCSCNLDDLIQLHSDIAENSVLSKNETLKAQLEIGKKNMQNLWKANGFPSPLLLKLMRDIVSGLCHLHELGMVHRDLKPQNILIINERSLCAKLSDMGISKRLLEDMSSFGHNGTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCITGGRHPFGERLERDFNIVRNQKDLFLVDYIPEAEDLISCLLNPEPDLRPKAVEVLHHPFFWDSEMRLSFLRDASDRVELEDRETNSDLLKALEGSAPAALNGNWDEKMEPTFIANIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGPIPEGFNDYFASRFPRLLIEVYKVMCKYCKAEECFQRYFKNV 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0029 926 ProSiteProfiles Protein kinase domain profile. 509 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0029 926 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 616 793 - -
Prci10g0029 926 Gene3D Transferase(Phosphotransferase) domain 1 610 793 - -
Prci10g0029 926 SUPERFAMILY Protein kinase-like (PK-like) 505 800 IPR011009 -
Prci10g0029 926 SMART serkin_6 509 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0029 926 SMART PGNneu 856 910 - -
Prci10g0029 926 Gene3D KEN domain 794 926 IPR038357 -
Prci10g0029 926 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 501 581 - -
Prci10g0029 926 CDD RNase_Ire1 795 923 - -
Prci10g0029 926 ProSiteProfiles KEN domain profile. 794 925 IPR010513 GO:0004540|GO:0006397
Prci10g0029 926 Pfam Protein kinase domain 511 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0029 926 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Prci10g0029 926 Gene3D Phosphorylase Kinase; domain 1 495 581 - -
Prci10g0029 926 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 795 926 - -
Prci10g0029 926 Pfam Ribonuclease 2-5A 797 923 IPR010513 GO:0004540|GO:0006397
Prci10g0029 926 PANTHER IRE1-RELATED 142 925 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0029 Prci-Chr10 228490 238586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0029 535 790 MAP Kinase Kinase Kinase AT3G06030 28.846 4.21e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Prci10g0029 Pkinase 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0029 K08852 - gmx:100788389 1027.31