Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0028 ATGAAATTTCAATTTCTTTGCACATCACGTGTTCTGATCATATTGCTAATTGTCTTTTGCTCGAGCTTAAACGGTGACATCTCGGTATCAAAGTCAGAGAGCTCTCAAGTCTCTCTTGTTGGTAATCGTGATGGAGACTTCAAGGGCTTGGCTCTGCCTGCTGGCCGCTCTCCTCTGTTTCCTCCAGCTAAGCCTAGTACGGCACTAATTGTTGCCCCAGATCAAAATGGGACTATACATTTGGTGGAGAGTGGTTCCATGAGGATAATATGGTCATTTCCAACAGGATCACCAATTTACGGTTCATATCAAGCTCCTGTCAACAAGGATAATGATAAAGAAAATGCATCTGGACCAAGCAATGAGTTCATAGATGTCGGAGATGACTGGAGCTTATATCAAAGAAAGCCCTTTGGTAAAATGGTATGGAGACTCTTAACATCTATTGAAGATATTGTTAAAGCTACACCTAAATTATCAAATGATGGAGTTCTTACACTTGGATCTAAAAGAATTACTGTTTTTGAAGTTGATGCTAAAACTGGAAGGATCTTTCGAAGTTACACTGCATCTGATTTTGATAATGCCTTTGCACTGTGGAGTGATGACAGGCAAAGTGTTCAAAATATTCTTACTACTGAAAATGAGGAGTTAGTAAAGTCTGATCCTCTTAAGCTTCATATGCCGGAGCCGCTACTCATGTTATTTAGGACAGATTATTCTCTACAAGCTGTTAGTCCTGGATCAGAAAAAGTTGCATGGAGTATGACTGTAGCTGAATTTGAGGCTGTCTTATATTGCCAACATAATGAAAATCCAATGGACGGGGCATTATTTGATTCAGAGGGTAAGTATGCTTGTGACAGTGGCCTGGATTTTGCTTTGCCATACCCATGTTGGGTGAAGCAAAAGGTCTACCGCCTGCCAAAAAGCTTTCCAGTACAACCTTCAATTGTTGAGAGATTCCCTGAGGCTACTTGTGATAATGAAATGCTCCCAATGCCCCATGCAGATCTGATGCTTCCTGTGCAGCCTAATAATCATAGATTTTTAAATGGCGATGATAATATTATGATGCTTCCCATGCCTGTGCCAGATTTGTTGCCTCCTCTGCTTCCACAAAGGGGCAACAGTGATGACACATTTGAGCTTCCTCCGCATCTGACACAGATTGCAACACGTGAGGAAGTTAATCTGAAGGGGGAGATTTCATGGTTAAAATATTTGCTTCTGGTACTGTTCATGGTCTCCATCTTGGTGTTGATTTTTCCCTCTTTGAAGTTAATCTGGCACTGTTCATTTCAAAAGCTATTGAAAAAAGGCCAAAATAGTGAGTTTGATTTAAAAAGTACCCTTAAGAGAAAGAAAACACGCAAGTCAGGAAAGAGCAGTGGAATTGTTGACAAGAAGGTTAAGCCATTGGTATCAGAAGATGACAAATCAATGCCACACTGTAGAGATGATAAGGAACCTCTGCTATATGTTGATAAAGCTGATGAATGTGCTGATGGGCGCAAGATTGGTAAATTATTTGTGTCAAATAAAGAAATTGCCAAGGGAAGCAATGGAACCATTGTTCTAGAGGGAACATATGAGTGTCGAGTGGTTGCTGTAAAGCGTCTTGTCCAGGCTCATCATGATGAGGCCTTTAAAGAAATTCAAAATCTTATTGCATCTGACTATCACCCAAACATTGTTCGATGGTTTGGGGTGGAAAATGATCAAGATTTTGTCTACCTTGCTCTAGAGCGTTGTTCATGTAACTTAGATGATTTAATTCAGCTTCACTCAGATATAGCAGAAAACTCAGTGTTGAGCAAGAACGAAACTTTAAAGGCTCAATTGGAGATAGGAAAGAAAAATATGCAGAACCTTTGGAAAGCAAATGGCTTCCCATCACCTCTCCTATTGAAGCTAATGAGAGATATAGTTTCGGGGCTTTGTCATTTGCATGAACTGGGAATGGTGCATCGGGATTTGAAACCCCAAAATATTTTGATAATCAATGAAAGATCTTTATGTGCAAAGCTTTCTGATATGGGCATTAGTAAACGACTTCTGGAAGATATGTCATCTTTTGGTCATAATGGTACTGGCTGCGGTAGTTCAGGCTGGCAAGCACCAGAACAACTTGTTCAAGGACGTCAAACACGAGCTGTTGATTTATTTAGTCTAGGTTGCGTCTTATTTTTTTGTATAACTGGAGGAAGACATCCATTTGGAGAACGTCTTGAACGTGATTTTAATATTGTGAGAAATCAAAAGGATCTTTTCTTAGTGGATTACATTCCTGAAGCAGAGGATCTTATTTCTTGTTTATTAAACCCTGAGCCTGATCTAAGGCCCAAGGCAGTTGAAGTATTGCACCATCCTTTCTTTTGGGATTCTGAAATGAGACTTTCCTTTCTCCGAGATGCCAGTGATAGAGTGGAATTGGAAGATAGGGAGACTAATTCTGATCTTTTGAAGGCGTTGGAAGGTAGTGCACCAGCGGCTTTAAATGGGAACTGGGATGAAAAAATGGAACCAACCTTCATTGCTAACATTGGTCGTTACCGGCGATACAAATATGACAGTGTTCGAGACTTATTACGAGTCATGAGAAACAAGCTGAATCACTATAGAGAATTGCCTCAAGAAATTCAGGAACTTGTGGGACCGATTCCAGAAGGATTCAATGACTACTTTGCAAGTCGGTTTCCTAGACTCCTAATTGAAGTGTATAAAGTCATGTGCAAATATTGCAAGGCTGAGGAATGTTTCCAGCGGTACTTTAAAAACGTTTAA 2787 0.4011 MKFQFLCTSRVLIILLIVFCSSLNGDISVSKSESSQVSLVGNRDGDFKGLALPAGRSPLFPPAKPSTALIVAPDQNGTIHLVESGSMRIIWSFPTGSPIYGSYQAPVNKDNDKENASGPSNEFIDVGDDWSLYQRKPFGKMVWRLLTSIEDIVKATPKLSNDGVLTLGSKRITVFEVDAKTGRIFRSYTASDFDNAFALWSDDRQSVQNILTTENEELVKSDPLKLHMPEPLLMLFRTDYSLQAVSPGSEKVAWSMTVAEFEAVLYCQHNENPMDGALFDSEGKYACDSGLDFALPYPCWVKQKVYRLPKSFPVQPSIVERFPEATCDNEMLPMPHADLMLPVQPNNHRFLNGDDNIMMLPMPVPDLLPPLLPQRGNSDDTFELPPHLTQIATREEVNLKGEISWLKYLLLVLFMVSILVLIFPSLKLIWHCSFQKLLKKGQNSEFDLKSTLKRKKTRKSGKSSGIVDKKVKPLVSEDDKSMPHCRDDKEPLLYVDKADECADGRKIGKLFVSNKEIAKGSNGTIVLEGTYECRVVAVKRLVQAHHDEAFKEIQNLIASDYHPNIVRWFGVENDQDFVYLALERCSCNLDDLIQLHSDIAENSVLSKNETLKAQLEIGKKNMQNLWKANGFPSPLLLKLMRDIVSGLCHLHELGMVHRDLKPQNILIINERSLCAKLSDMGISKRLLEDMSSFGHNGTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCITGGRHPFGERLERDFNIVRNQKDLFLVDYIPEAEDLISCLLNPEPDLRPKAVEVLHHPFFWDSEMRLSFLRDASDRVELEDRETNSDLLKALEGSAPAALNGNWDEKMEPTFIANIGRYRRYKYDSVRDLLRVMRNKLNHYRELPQEIQELVGPIPEGFNDYFASRFPRLLIEVYKVMCKYCKAEECFQRYFKNV 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0028 928 Pfam Protein kinase domain 513 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0028 928 SUPERFAMILY Protein kinase-like (PK-like) 507 802 IPR011009 -
Prci10g0028 928 Gene3D Phosphorylase Kinase; domain 1 497 583 - -
Prci10g0028 928 CDD RNase_Ire1 797 925 - -
Prci10g0028 928 SMART PGNneu 858 912 - -
Prci10g0028 928 Gene3D KEN domain 796 928 IPR038357 -
Prci10g0028 928 ProSiteProfiles Protein kinase domain profile. 511 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0028 928 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 797 928 - -
Prci10g0028 928 Gene3D Transferase(Phosphotransferase) domain 1 612 795 - -
Prci10g0028 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Prci10g0028 928 ProSiteProfiles KEN domain profile. 796 927 IPR010513 GO:0004540|GO:0006397
Prci10g0028 928 Pfam Ribonuclease 2-5A 799 925 IPR010513 GO:0004540|GO:0006397
Prci10g0028 928 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 618 795 - -
Prci10g0028 928 SMART serkin_6 511 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g0028 928 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 503 583 - -
Prci10g0028 928 PANTHER IRE1-RELATED 142 927 IPR045133 GO:0004521|GO:0004674|GO:0030968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0028 Prci-Chr10 228490 238586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0028 537 792 MAP Kinase Kinase Kinase AT3G06030 28.846 4.73e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Prci10g0028 Pkinase 3.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0028 K08852 - gmx:100788389 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0028 10 228490 238586 Prci10g0028 10 228490 238586 ECH