Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0016 ATGAATGACAAGGTTGCTACTTCGGTGGTTGAACGGTACAAGTTCTACATACTGCCTCCTGTTGAAGCCTCAACATCTAGCCCAGTCAGAGTTGCATATCAGATGGGCAATTCGAGGGATAATGAATCAGGAGGTCCTCATCCGGCTGAGGAGCATGGTGGATCTGACGCTATAAAGGGAGGAGGTCCAGCAAGTGATGCAGATTTATGCTTCCCCTCCCCTGGCCCTAAGATTTCTCAAGCTGAAGATTGTGCTTGTCATTCTACGGCTGAACAGTTTAGCAGATCTCGAAATATTGTGAAGCAGGAAAGAATCTCTCAGAAAAATTACATACGTGTGGACCCAAGTTACCTGAAAACTCTTGTTCAAGTTCATTCTGGGTGGATTTTCGGTGGAATAGCTGAACTTGTTGATAATTCAAGAGACACCAAGGCAGCTAAGATGGACATTTTTATAGATACGATAAAGTTGAAGAAATCTGGTAACGATGAACCTATGCTTTCAGTTATTGATGATGGCCAAGGTATGGAATACAAAGACATTTTGAAAATGGTTTCCTTTGGGCACAAGCAAAGTAATAGTGATGATCCAGATCGCATTGGAAGATTTGGTGTTGGATTCAAGACTGGAGCAATGAGGCTTGGCAATGATGCTCTTGTTTTAACCCAGACTGCTAATTCCAGATGTATAGCTTTCCTTTCACAGTCTTTGAATGAAGGGAAAGAGAATGTTGAGATCTCCGTAGTTTGCTATCGCCGACGAGGACAGTGCATGGAAGTGGATACAAATGTTCGGTCTGAAGCTGAGGCAAAATGCAATTTGAAAGCCATAAAGGAATTTTCACCATTTAATAAGTATCTTATTGGTGAAAAGTTAGCATTGTTTTCCGGTGGCACAGGAACACAAATCTACATACGGAATCTTGATAAATGGGGATCAAATTATTGTCTGCAATGGTATGATGGATTAAAAGGTAGCAGCTCTTTCCACGATCGTGACATTTTCATCCGATCTAGAAGGATCCGTTCTCGCCCTGGCCAAGTCAGTGTTAAGGTTCAATTGGATTATTCACTTCGATCTTATCTGGAAGTTATCTTCTTAGTTCCTCGGATGAAAATAAGTGTTCAACATTCACTGGTTAGAAGTCGTCCTCTGGGAAATTTTCTTACTAAAACTGTCATTGAAACCGGTTTTGTCCTGGGAAAGCATGTGCACTTGATCCTGGGATTCAGTCAATTAGAATGGGAGCAGGCAAACTGCGGAATATTTTTGTATTGGCGTGGTCGCTTGATTGAAGCTTACAAGAGAGTTGGTGGCATGATTCGTAATGCAGACGTGGGCCGTGGTGTAATTGGTGTCATAGACGTGACTGATTTAATGAATGATGGCGATGGTCGTATCTGGGTGCATAATAACAAGCAGGGATTCCAGGACTGTGAATCATATGCACTTCTAGAGCTGTGGCTTGGTAGAAAAGTAGATGAATACTTGGACAACAATTTTGATTCACTTAAGTTGGACAATGAAAATTGTGTCTACAAACCAGATTGCGAATGGGTACAGTGTGACAAGTGCAGAAAATGGAGAATTTTGCCTCTTGACTTTGACGTCACATTGTTGCCTGCACAATGGTTCTGTTACATGGAGCCCTTCAAAGGACTGTGTTCAGCTGCGGAACAAAAAATGGAGCCTAGCGTTGTCAATGTTTCGACAAAGCGGTGTGGATATGATACTGACAAGGGTACAGATGAAAGGGGGGTGGCGTGTGGAGATCTGAAACCGCGTGCTTTAAAAAGATTGAGGTAG 1806 0.4241 MNDKVATSVVERYKFYILPPVEASTSSPVRVAYQMGNSRDNESGGPHPAEEHGGSDAIKGGGPASDADLCFPSPGPKISQAEDCACHSTAEQFSRSRNIVKQERISQKNYIRVDPSYLKTLVQVHSGWIFGGIAELVDNSRDTKAAKMDIFIDTIKLKKSGNDEPMLSVIDDGQGMEYKDILKMVSFGHKQSNSDDPDRIGRFGVGFKTGAMRLGNDALVLTQTANSRCIAFLSQSLNEGKENVEISVVCYRRRGQCMEVDTNVRSEAEAKCNLKAIKEFSPFNKYLIGEKLALFSGGTGTQIYIRNLDKWGSNYCLQWYDGLKGSSSFHDRDIFIRSRRIRSRPGQVSVKVQLDYSLRSYLEVIFLVPRMKISVQHSLVRSRPLGNFLTKTVIETGFVLGKHVHLILGFSQLEWEQANCGIFLYWRGRLIEAYKRVGGMIRNADVGRGVIGVIDVTDLMNDGDGRIWVHNNKQGFQDCESYALLELWLGRKVDEYLDNNFDSLKLDNENCVYKPDCEWVQCDKCRKWRILPLDFDVTLLPAQWFCYMEPFKGLCSAAEQKMEPSVVNVSTKRCGYDTDKGTDERGVACGDLKPRALKRLR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0016 601 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 128 296 IPR036890 -
Prci10g0016 601 Gene3D - 505 564 - -
Prci10g0016 601 Gene3D - 99 310 IPR036890 -
Prci10g0016 601 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 133 244 - -
Prci10g0016 601 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 88 572 IPR045261 GO:0016887
Prci10g0016 601 Pfam CW-type Zinc Finger 518 560 IPR011124 GO:0008270
Prci10g0016 601 Pfam Morc6 ribosomal protein S5 domain 2-like 356 496 IPR041006 -
Prci10g0016 601 MobiDBLite consensus disorder prediction 36 66 - -
Prci10g0016 601 ProSiteProfiles Zinc finger CW-type profile. 513 563 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0016 Prci-Chr10 138224 150696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0016 518 560 B3 DNA Binding Superfamily AT4G32010 45.652 4.13e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0016 - - cam:101494973 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0016 10 138224 150696 Prci10g0016 10 138224 150696 ECH