Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0012 ATGAATGCGTCCGCTTCAAATTCAGGCACTTCTTGTACAATGTCTTCGTCTACAATGATCATTTCTGCTGATACAGCAGAGCCTTCTCCGCTTGATTCAGTTCCCACCTCGGCCGTCAATGGTTCTGCTACCTCTCCTTTGAACAGTGACCAAAACCCACCTCACTCATCCGCATCTTTGTCCCCGCCTCCAGAACTCGAACTACCTGTATCGTGGCCCCAGGATGGAAAGCTTAGTCTCGATTGGATCTATAATCTTATGGCTTGCTTCGACTGGTCTTCCAAGAACCTCTCCCCTTCTGAATTTCCTTGTGTTTTCCCGGTCCATGTCTTCGACTCTCTCATCCTTGTGGCTTCCAAAATGCTTCACAAAGAACCTAACTGTGTATCTGTAGACCCCTTTCAACCCAATTCTGACTCCCGGGACCGAGCTGCTTCCGCAGTTGTCGTTGTGGGGGACGTTCACGGCCAATTGCATGATCTATTGTTCCTCCTTAGGGATGCTGGTTATCCTTCTCAAAATCGCATATTCGTCTTCAATGGGGATTATGTTGATAGAGGAGCTTGGGGTCTGGAAACTTTCTTACTCTTGTTAGCGTGGAAGGTGTTTATGCCGCATAATGTGTATTTACTGCGTGGGAATCACGAATCAAAATACTGTACATCTGTTTATGGCTTTGAGAAGGAAGTTATGGCAAAGTACAGTGATAAAGCTCATGGAGGACTTTTCCGCAGTGTATCTGTGACTCCATCGAAGAGATTAAAAGGAAAGAGGAACCGTAAGAATTATTCCATCCCTGATAATAAAACCTTGTCTCTTGGTTCGTTGGAAGAATTATCTAAAGCTCGGCGATCAGTTCTTGATCCTCCTTGGGAAGGTTCAAACCTGATTCCTGGCGATGTTTTGTGGTCTGATCCTTCGCAAACTCCTGGCCTTTCTCCGAACAAAGAAAGAGGCATTGGCTTATTGTGGGGTCCTGATTGTACTGAGGAATTCTTGAAGAAGTATCAACTAAAGTTTATCATCAGGTCACATGAAGGTCCTGATGCGAGAGAAAAGAGGGATGGTTTTGATGGAATGGATGAAGGTTACACTATCGATCATATTGTGGACTCTGGAAAGATGATCACCCTTTTCAGTGCTCCAGATTACCCACAGTTTCAGGCAACAGATGACAGGTATAATAACAAAGGCGCTTATGTTGTCCTTGAACCCCCGCATTTTGACAATCCAGTATTTCATTGCTTTGAAGCAGTTATACCAAGGCCCAAGGTGAATGCTTATTATGATTATGAAGAGGTGATAAACTCGGATGAAGAATTGGACTTGGCATCCATGGTGACTGCCTGA 1350 0.4474 MNASASNSGTSCTMSSSTMIISADTAEPSPLDSVPTSAVNGSATSPLNSDQNPPHSSASLSPPPELELPVSWPQDGKLSLDWIYNLMACFDWSSKNLSPSEFPCVFPVHVFDSLILVASKMLHKEPNCVSVDPFQPNSDSRDRAASAVVVVGDVHGQLHDLLFLLRDAGYPSQNRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNVYLLRGNHESKYCTSVYGFEKEVMAKYSDKAHGGLFRSVSVTPSKRLKGKRNRKNYSIPDNKTLSLGSLEELSKARRSVLDPPWEGSNLIPGDVLWSDPSQTPGLSPNKERGIGLLWGPDCTEEFLKKYQLKFIIRSHEGPDAREKRDGFDGMDEGYTIDHIVDSGKMITLFSAPDYPQFQATDDRYNNKGAYVVLEPPHFDNPVFHCFEAVIPRPKVNAYYDYEEVINSDEELDLASMVTA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0012 449 ProSitePatterns Serine/threonine specific protein phosphatases signature. 211 216 IPR006186 GO:0016787
Prci10g0012 449 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 52 236 - -
Prci10g0012 449 SUPERFAMILY Metallo-dependent phosphatases 101 424 IPR029052 -
Prci10g0012 449 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Prci10g0012 449 PRINTS Serine/threonine phosphatase family signature 210 234 IPR006186 GO:0016787
Prci10g0012 449 PRINTS Serine/threonine phosphatase family signature 280 307 IPR006186 GO:0016787
Prci10g0012 449 PRINTS Serine/threonine phosphatase family signature 147 174 IPR006186 GO:0016787
Prci10g0012 449 PRINTS Serine/threonine phosphatase family signature 374 390 IPR006186 GO:0016787
Prci10g0012 449 Gene3D - 104 447 IPR029052 -
Prci10g0012 449 SMART pp2a_7 106 423 IPR006186 GO:0016787
Prci10g0012 449 MobiDBLite consensus disorder prediction 23 68 - -
Prci10g0012 449 Pfam Calcineurin-like phosphoesterase 148 348 IPR004843 GO:0016787
Prci10g0012 449 MobiDBLite consensus disorder prediction 23 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0012 Prci-Chr10 79689 90212 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g0012 69 339 Calmodulin-binding Proteins AT5G63870 61.873 2.59e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0012 K04460 - qsa:O6P43_024986 669.463